RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 UQCRHP07919 91 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 RESTQ13127 1097 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 KRT32Q14532 448 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 CAMK4Q16566 473 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 DCCP43146 1447 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
ARHGEF1-202ENST00000347545 PIBF1Q8WXW3 757 aa17.23■□□□□ 0.35
ARHGEF1-202ENST00000347545 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
ARHGEF1-202ENST00000347545 ATF3P18847 181 aa17.23■□□□□ 0.35
ARHGEF1-202ENST00000347545 CPDO75976 1380 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 SCRN1Q12765 414 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 BRF1Q92994 677 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 SPATA32Q96LK8 384 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 DACT1Q9NYF0 836 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
ARHGEF1-202ENST00000347545 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 CCDC192P0DO97 292 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 TYRO3Q06418 890 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 GOLIM4O00461 696 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 TIMM10P62072 90 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 LRRC24Q50LG9 513 aa17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 RBM43Q6ZSC3 357 aaKnown RBP17.21■□□□□ 0.35
ARHGEF1-202ENST00000347545 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 A1BGP04217 495 aa17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 PAG1Q9NWQ8 432 aa17.2■□□□□ 0.34
ARHGEF1-202ENST00000347545 PDCL3Q9H2J4 239 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 SPTLC3Q9NUV7 552 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 NR1I2O75469 434 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 ADD1P35611 737 aaKnown RBP17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 CLSTN2Q9H4D0 955 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 LUZP1Q86V48 1076 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 CWC25Q9NXE8 425 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF1-202ENST00000347545 PFKFB2O60825 505 aa17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 HSP90B1P14625 803 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 ZMYM1Q5SVZ6 1142 aa17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 PYCARDQ9ULZ3 195 aa17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 GPR108Q9NPR9 543 aa17.18■□□□□ 0.34
ARHGEF1-202ENST00000347545 PUS3Q9BZE2 481 aaKnown RBP17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 HELLSQ9NRZ9 838 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 MAST3O60307 1309 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 AGXT2Q9BYV1 514 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 CBX8Q9HC52 389 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 MYH7P12883 1935 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 DSCC1Q9BVC3 393 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 TNS2Q63HR2 1409 aa17.17■□□□□ 0.34
ARHGEF1-202ENST00000347545 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 SPC24Q8NBT2 197 aa17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 FTOQ9C0B1 505 aaKnown RBP eCLIP17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 M0R2C6 588 aa17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 HSPD1P10809 573 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 DDX19AQ9NUU7 478 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
ARHGEF1-202ENST00000347545 EYA2O00167 538 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 DYNC1I1O14576 645 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 E7EWF7 191 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 FOXP2O15409 715 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 FOSBP53539 338 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 KIAA1524Q8TCG1 905 aa17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
ARHGEF1-202ENST00000347545 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.34
ARHGEF1-202ENST00000347545 A0A1B0GUL7 405 aa17.14■□□□□ 0.33
ARHGEF1-202ENST00000347545 TTLL5Q6EMB2 1281 aa17.14■□□□□ 0.33
ARHGEF1-202ENST00000347545 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
ARHGEF1-202ENST00000347545 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
ARHGEF1-202ENST00000347545 MYRIPQ8NFW9 859 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms