RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
NPTN-201ENST00000345330 IFIT1P09914 478 aaKnown RBP16.56■□□□□ 0.24
NPTN-201ENST00000345330 ME3Q16798 604 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 NECAB1Q8N987 351 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
NPTN-201ENST00000345330 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
NPTN-201ENST00000345330 USPL1Q5W0Q7 1092 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 CCDC87Q9NVE4 849 aa16.56■□□□□ 0.24
NPTN-201ENST00000345330 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
NPTN-201ENST00000345330 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
NPTN-201ENST00000345330 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 SUSD4Q5VX71 490 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 PANK2Q9BZ23 570 aa16.55■□□□□ 0.24
NPTN-201ENST00000345330 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
NPTN-201ENST00000345330 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
NPTN-201ENST00000345330 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
NPTN-201ENST00000345330 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 GPT2Q8TD30 523 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 RFX7Q2KHR2 1363 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 GOLGA6L3A6NEY3 463 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 CYP21A2P08686 494 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 TOB2Q14106 344 aaPredicted RBP16.54■□□□□ 0.24
NPTN-201ENST00000345330 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 NWD2Q9ULI1 1742 aa16.54■□□□□ 0.24
NPTN-201ENST00000345330 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 GOLGA6L22H0YM25 854 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 SNAP23O00161 211 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 VGLL2Q8N8G2 317 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 SH3TC1Q8TE82 1336 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 M0R2C6 588 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 RPS6KB1P23443 525 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 METTL24Q5JXM2 366 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
NPTN-201ENST00000345330 MAST3O60307 1309 aa16.52■□□□□ 0.24
NPTN-201ENST00000345330 MYH3P11055 1940 aa16.52■□□□□ 0.24
NPTN-201ENST00000345330 ZAP70P43403 619 aa16.52■□□□□ 0.24
NPTN-201ENST00000345330 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.24
NPTN-201ENST00000345330 HELBQ8NG08 1087 aaPredicted RBP16.52■□□□□ 0.24
NPTN-201ENST00000345330 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
NPTN-201ENST00000345330 RBM27Q9P2N5 1060 aaKnown RBP16.52■□□□□ 0.24
NPTN-201ENST00000345330 PDE8AO60658 829 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 TTC39AQ5SRH9 613 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 COL4A1P02462 1669 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 ANKRD18BA2A2Z9 1011 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 SYT1P21579 422 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 ATP2B3Q16720 1220 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
NPTN-201ENST00000345330 FOXP2O15409 715 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
NPTN-201ENST00000345330 GJB2P29033 226 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 NGLY1Q96IV0 654 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 CNNM1Q9NRU3 951 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
NPTN-201ENST00000345330 MCAMP43121 646 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
NPTN-201ENST00000345330 LINC00116Q8NCU8 138 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 AKAP2Q9Y2D5 859 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 RREB1Q92766 1687 aa16.5■□□□□ 0.23
NPTN-201ENST00000345330 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
NPTN-201ENST00000345330 PSMA5P28066 241 aa16.49■□□□□ 0.23
NPTN-201ENST00000345330 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
NPTN-201ENST00000345330 TTLL5Q6EMB2 1281 aa16.49■□□□□ 0.23
NPTN-201ENST00000345330 HELLSQ9NRZ9 838 aa16.49■□□□□ 0.23
NPTN-201ENST00000345330 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
NPTN-201ENST00000345330 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
NPTN-201ENST00000345330 PTMSP20962 102 aa16.48■□□□□ 0.23
NPTN-201ENST00000345330 STK3Q13188 491 aa16.48■□□□□ 0.23
NPTN-201ENST00000345330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
NPTN-201ENST00000345330 NEK1Q96PY6 1258 aa16.48■□□□□ 0.23
NPTN-201ENST00000345330 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
NPTN-201ENST00000345330 STX6O43752 255 aa16.47■□□□□ 0.23
NPTN-201ENST00000345330 GADD45BO75293 160 aaPredicted RBP16.47■□□□□ 0.23
NPTN-201ENST00000345330 PUS7LQ9H0K6 701 aaKnown RBP16.47■□□□□ 0.23
NPTN-201ENST00000345330 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
NPTN-201ENST00000345330 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
NPTN-201ENST00000345330 AKAP11Q9UKA4 1901 aa16.47■□□□□ 0.23
NPTN-201ENST00000345330 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
NPTN-201ENST00000345330 PDE8BO95263 885 aa16.47■□□□□ 0.23
NPTN-201ENST00000345330 NTSR2O95665 410 aa16.47■□□□□ 0.23
NPTN-201ENST00000345330 PHKA1P46020 1223 aa16.47■□□□□ 0.23
NPTN-201ENST00000345330 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms