RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
CDC42-202ENST00000344548 RAD50Q92878 1312 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
CDC42-202ENST00000344548 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
CDC42-202ENST00000344548 ZPR1O75312 459 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 TAF5LO75529 589 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 HSPA4P34932 840 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 ATP2B3Q16720 1220 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 C4AP0C0L4 1744 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 PDE8BO95263 885 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
CDC42-202ENST00000344548 LRP5O75197 1615 aa16.44■□□□□ 0.22
CDC42-202ENST00000344548 COL9A3Q14050 684 aaPredicted RBP16.43■□□□□ 0.22
CDC42-202ENST00000344548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
CDC42-202ENST00000344548 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
CDC42-202ENST00000344548 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
CDC42-202ENST00000344548 ZNF772Q68DY9 489 aaPredicted RBP16.43■□□□□ 0.22
CDC42-202ENST00000344548 PAG1Q9NWQ8 432 aa16.43■□□□□ 0.22
CDC42-202ENST00000344548 AKAP2Q9Y2D5 859 aa16.43■□□□□ 0.22
CDC42-202ENST00000344548 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
CDC42-202ENST00000344548 CCDC152Q4G0S7 254 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
CDC42-202ENST00000344548 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 LAMB2P55268 1798 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 RFC4P35249 363 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 KBTBD3Q8NAB2 608 aa16.42■□□□□ 0.22
CDC42-202ENST00000344548 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 FGFR2P21802 821 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 NEK4P51957 841 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 FKBP4Q02790 459 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDC42-202ENST00000344548 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 SNX14Q9Y5W7 946 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 TAF6LQ9Y6J9 622 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
CDC42-202ENST00000344548 ZAP70P43403 619 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 KIAA1211Q6ZU35 1233 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 CCDC171Q6TFL3 1326 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 UBR3Q6ZT12 1888 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
CDC42-202ENST00000344548 MCAMP43121 646 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 PHKA1P46020 1223 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 NFIXQ14938 502 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
CDC42-202ENST00000344548 SLC10A5Q5PT55 438 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
CDC42-202ENST00000344548 IL17RAQ96F46 866 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 MPHOSPH8Q99549 860 aa16.4■□□□□ 0.22
CDC42-202ENST00000344548 CPA1P15085 419 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 DDIT3P35638 169 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 CCDC158Q5M9N0 1113 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
CDC42-202ENST00000344548 COL24A1Q17RW2 1714 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 RGL2O15211 777 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 ANAPC15P60006 121 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 NECTIN1Q15223 517 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
CDC42-202ENST00000344548 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
CDC42-202ENST00000344548 HIP1O00291 1037 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
CDC42-202ENST00000344548 MCCP23508 829 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 POTEAQ6S8J7 498 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
CDC42-202ENST00000344548 AKAP11Q9UKA4 1901 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 MROH5Q6ZUA9 1318 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 GYS1P13807 737 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 CHRNDQ07001 517 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
CDC42-202ENST00000344548 RXRBP28702 533 aa16.37■□□□□ 0.21
CDC42-202ENST00000344548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDC42-202ENST00000344548 IGHMBP2P38935 993 aaKnown RBP16.36■□□□□ 0.21
CDC42-202ENST00000344548 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
CDC42-202ENST00000344548 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
CDC42-202ENST00000344548 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
CDC42-202ENST00000344548 NOL8Q76FK4 1167 aaKnown RBP16.36■□□□□ 0.21
CDC42-202ENST00000344548 CYP2E1P05181 493 aaPredicted RBP16.36■□□□□ 0.21
CDC42-202ENST00000344548 TM4SF1P30408 202 aa16.36■□□□□ 0.21
CDC42-202ENST00000344548 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
CDC42-202ENST00000344548 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
CDC42-202ENST00000344548 LPIN2Q92539 896 aa16.36■□□□□ 0.21
CDC42-202ENST00000344548 TNRC6CQ9HCJ0 1690 aaKnown RBP16.36■□□□□ 0.21
CDC42-202ENST00000344548 APBA3O96018 575 aa16.35■□□□□ 0.21
CDC42-202ENST00000344548 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
CDC42-202ENST00000344548 MYO5AQ9Y4I1 1855 aaKnown RBP16.35■□□□□ 0.21
CDC42-202ENST00000344548 ST18O60284 1047 aa16.35■□□□□ 0.21
CDC42-202ENST00000344548 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
CDC42-202ENST00000344548 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
CDC42-202ENST00000344548 CREB3L3Q68CJ9 461 aa16.35■□□□□ 0.21
CDC42-202ENST00000344548 KCNB2Q92953 911 aa16.35■□□□□ 0.21
CDC42-202ENST00000344548 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
CDC42-202ENST00000344548 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms