RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CEP126Q9P2H0 1117 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 ZNF609O15014 1411 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 SPEF2Q9C093 1822 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-201ENST00000343575 SDSP20132 328 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 DBNDD2Q9BQY9 259 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 CNNM1Q9NRU3 951 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
CXCL12-201ENST00000343575 NPHP1O15259 732 aa17.98■□□□□ 0.47
CXCL12-201ENST00000343575 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 A0A1B0GUL7 405 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 CDC5LQ99459 802 aaKnown RBP17.97■□□□□ 0.47
CXCL12-201ENST00000343575 ECHDC1Q9NTX5 307 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 PDE8BO95263 885 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 SEC24BO95487 1268 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 ST5P78524 1137 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
CXCL12-201ENST00000343575 MPHOSPH8Q99549 860 aa17.97■□□□□ 0.47
CXCL12-201ENST00000343575 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
CXCL12-201ENST00000343575 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
CXCL12-201ENST00000343575 GSE1Q14687 1217 aa17.96■□□□□ 0.47
CXCL12-201ENST00000343575 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
CXCL12-201ENST00000343575 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
CXCL12-201ENST00000343575 BSDC1Q9NW68 430 aaPredicted RBP17.96■□□□□ 0.47
CXCL12-201ENST00000343575 SNAP23O00161 211 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 FGFR2P21802 821 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
CXCL12-201ENST00000343575 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 TAF5LO75529 589 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 ADORA1P30542 326 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 CHRNDQ07001 517 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 PARP3Q9Y6F1 533 aa17.95■□□□□ 0.46
CXCL12-201ENST00000343575 WTIPA6NIX2 430 aaPredicted RBP17.94■□□□□ 0.46
CXCL12-201ENST00000343575 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
CXCL12-201ENST00000343575 NEUROD6Q96NK8 337 aa17.94■□□□□ 0.46
CXCL12-201ENST00000343575 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
CXCL12-201ENST00000343575 MINPP1Q9UNW1 487 aa17.94■□□□□ 0.46
CXCL12-201ENST00000343575 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
CXCL12-201ENST00000343575 DDX46Q7L014 1031 aaKnown RBP17.93■□□□□ 0.46
CXCL12-201ENST00000343575 AKAP2Q9Y2D5 859 aa17.93■□□□□ 0.46
CXCL12-201ENST00000343575 A0A1B0GUL6 1792 aa17.93■□□□□ 0.46
CXCL12-201ENST00000343575 MAP4K4O95819 1239 aaPredicted RBP17.92■□□□□ 0.46
CXCL12-201ENST00000343575 ATP5JP18859 108 aa17.92■□□□□ 0.46
CXCL12-201ENST00000343575 HOXA10P31260 410 aaPredicted RBP17.92■□□□□ 0.46
CXCL12-201ENST00000343575 ATP2B3Q16720 1220 aa17.92■□□□□ 0.46
CXCL12-201ENST00000343575 TBC1D9Q6ZT07 1266 aa17.92■□□□□ 0.46
CXCL12-201ENST00000343575 XAGE2Q96GT9 111 aa17.92■□□□□ 0.46
CXCL12-201ENST00000343575 ERC2O15083 957 aa17.91■□□□□ 0.46
CXCL12-201ENST00000343575 GRAPQ13588 217 aa17.91■□□□□ 0.46
CXCL12-201ENST00000343575 GRAPLQ8TC17 118 aaPredicted RBP17.91■□□□□ 0.46
CXCL12-201ENST00000343575 GPATCH3Q96I76 525 aa17.91■□□□□ 0.46
CXCL12-201ENST00000343575 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
CXCL12-201ENST00000343575 SRGNP10124 158 aa17.9■□□□□ 0.46
CXCL12-201ENST00000343575 PUM3Q15397 648 aaKnown RBP17.9■□□□□ 0.46
CXCL12-201ENST00000343575 SLC16A10Q8TF71 515 aa17.9■□□□□ 0.46
CXCL12-201ENST00000343575 NDUFB9Q9Y6M9 179 aa17.9■□□□□ 0.46
CXCL12-201ENST00000343575 COL11A2P13942 1736 aaPredicted RBP17.89■□□□□ 0.45
CXCL12-201ENST00000343575 CDC45O75419 566 aa17.89■□□□□ 0.45
CXCL12-201ENST00000343575 LPIN2Q92539 896 aa17.89■□□□□ 0.45
CXCL12-201ENST00000343575 RPGRQ92834 1020 aaKnown RBP17.89■□□□□ 0.45
CXCL12-201ENST00000343575 EDC3Q96F86 508 aaKnown RBP17.89■□□□□ 0.45
CXCL12-201ENST00000343575 TRIM6-TRIM34B2RNG4 842 aa17.88■□□□□ 0.45
CXCL12-201ENST00000343575 NFKBIBQ15653 356 aa17.88■□□□□ 0.45
CXCL12-201ENST00000343575 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
CXCL12-201ENST00000343575 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
CXCL12-201ENST00000343575 CRAMP1Q96RY5 1269 aa17.88■□□□□ 0.45
CXCL12-201ENST00000343575 ARAP2Q8WZ64 1704 aa17.88■□□□□ 0.45
CXCL12-201ENST00000343575 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
CXCL12-201ENST00000343575 SCARF1Q14162 830 aa17.87■□□□□ 0.45
CXCL12-201ENST00000343575 R3HDM1Q15032 1099 aaKnown RBP17.87■□□□□ 0.45
CXCL12-201ENST00000343575 HAUS7Q99871 368 aa17.87■□□□□ 0.45
CXCL12-201ENST00000343575 CHMLP26374 656 aa17.86■□□□□ 0.45
CXCL12-201ENST00000343575 PDE6BP35913 854 aa17.86■□□□□ 0.45
CXCL12-201ENST00000343575 AK9Q5TCS8 1911 aa17.86■□□□□ 0.45
CXCL12-201ENST00000343575 AKAP11Q9UKA4 1901 aa17.86■□□□□ 0.45
CXCL12-201ENST00000343575 ZBTB7AO95365 584 aa17.86■□□□□ 0.45
CXCL12-201ENST00000343575 PHKA1P46020 1223 aa17.86■□□□□ 0.45
CXCL12-201ENST00000343575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.86■□□□□ 0.45
CXCL12-201ENST00000343575 IRS2Q9Y4H2 1338 aa17.85■□□□□ 0.45
CXCL12-201ENST00000343575 UBE4AQ14139 1066 aa17.85■□□□□ 0.45
CXCL12-201ENST00000343575 CCDC102BQ68D86 513 aa17.85■□□□□ 0.45
CXCL12-201ENST00000343575 CNTROBQ8N137 903 aa17.85■□□□□ 0.45
CXCL12-201ENST00000343575 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
CXCL12-201ENST00000343575 ZNF512BQ96KM6 892 aaPredicted RBP17.85■□□□□ 0.45
CXCL12-201ENST00000343575 IL25Q9H293 177 aa17.85■□□□□ 0.45
CXCL12-201ENST00000343575 BBOX1O75936 387 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 SLC5A1P13866 664 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 NPR1P16066 1061 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 KLRK1P26718 216 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 CCDC158Q5M9N0 1113 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 PI16Q6UXB8 463 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 C10orf71Q711Q0 1435 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 MCAMP43121 646 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 BCAMP50895 628 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 GORABQ5T7V8 394 aa17.84■□□□□ 0.45
CXCL12-201ENST00000343575 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
CXCL12-201ENST00000343575 ARID4AP29374 1257 aaPredicted RBP17.83■□□□□ 0.44
CXCL12-201ENST00000343575 CHRNA5P30532 468 aa17.83■□□□□ 0.44
CXCL12-201ENST00000343575 TTC39AQ5SRH9 613 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms