RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 HPS5Q9UPZ3 1129 aa22.18■■□□□ 1.14
TRA2B-202ENST00000342294 MAPK8IP3Q9UPT6 1336 aa22.17■■□□□ 1.14
TRA2B-202ENST00000342294 TBC1D16Q8TBP0 767 aa22.17■■□□□ 1.14
TRA2B-202ENST00000342294 ZNF428Q96B54 188 aa22.17■■□□□ 1.14
TRA2B-202ENST00000342294 EYA3Q99504 573 aa22.17■■□□□ 1.14
TRA2B-202ENST00000342294 COL4A1P02462 1669 aa22.17■■□□□ 1.14
TRA2B-202ENST00000342294 ZNF280AP59817 542 aaPredicted RBP22.16■■□□□ 1.14
TRA2B-202ENST00000342294 FAM89AQ96GI7 184 aa22.16■■□□□ 1.14
TRA2B-202ENST00000342294 ISCA1Q9BUE6 129 aa22.16■■□□□ 1.14
TRA2B-202ENST00000342294 AKAP11Q9UKA4 1901 aa22.16■■□□□ 1.14
TRA2B-202ENST00000342294 FKBP1BP68106 108 aa22.15■■□□□ 1.14
TRA2B-202ENST00000342294 ZNF609O15014 1411 aa22.14■■□□□ 1.14
TRA2B-202ENST00000342294 DDX60Q8IY21 1712 aaKnown RBP22.14■■□□□ 1.14
TRA2B-202ENST00000342294 RIPK4P57078 832 aa22.14■■□□□ 1.13
TRA2B-202ENST00000342294 PKN2Q16513 984 aaKnown RBP22.14■■□□□ 1.13
TRA2B-202ENST00000342294 PLBD2Q8NHP8 589 aa22.14■■□□□ 1.13
TRA2B-202ENST00000342294 PODXL2Q9NZ53 605 aa22.14■■□□□ 1.13
TRA2B-202ENST00000342294 RPS8P62241 208 aaKnown RBP22.13■■□□□ 1.13
TRA2B-202ENST00000342294 SCARF1Q14162 830 aa22.13■■□□□ 1.13
TRA2B-202ENST00000342294 ZC3H12CQ9C0D7 883 aaKnown RBP22.13■■□□□ 1.13
TRA2B-202ENST00000342294 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
TRA2B-202ENST00000342294 ANGEL2Q5VTE6 544 aaKnown RBP22.12■■□□□ 1.13
TRA2B-202ENST00000342294 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
TRA2B-202ENST00000342294 SCN9AQ15858 1988 aa22.12■■□□□ 1.13
TRA2B-202ENST00000342294 ANKRD13DQ6ZTN6 518 aa22.11■■□□□ 1.13
TRA2B-202ENST00000342294 AGBL3Q8NEM8 1001 aa22.11■■□□□ 1.13
TRA2B-202ENST00000342294 ZNF296Q8WUU4 475 aaPredicted RBP22.11■■□□□ 1.13
TRA2B-202ENST00000342294 GMLQ99445 158 aa22.11■■□□□ 1.13
TRA2B-202ENST00000342294 ATP5J2-PTCD1G3V325 749 aa22.1■■□□□ 1.13
TRA2B-202ENST00000342294 TRIM28Q13263 835 aaKnown RBP22.1■■□□□ 1.13
TRA2B-202ENST00000342294 RSBN1LQ6PCB5 846 aaPredicted RBP22.1■■□□□ 1.13
TRA2B-202ENST00000342294 PITPNM2Q9BZ72 1349 aa22.09■■□□□ 1.13
TRA2B-202ENST00000342294 CHL1O00533 1208 aa22.09■■□□□ 1.13
TRA2B-202ENST00000342294 IRS4O14654 1257 aaPredicted RBP22.09■■□□□ 1.13
TRA2B-202ENST00000342294 TBC1D8O95759 1140 aa22.09■■□□□ 1.13
TRA2B-202ENST00000342294 TMPOP42166 694 aaKnown RBP22.09■■□□□ 1.13
TRA2B-202ENST00000342294 MOB2Q70IA6 237 aa22.09■■□□□ 1.13
TRA2B-202ENST00000342294 PAPPA2Q9BXP8 1791 aa22.09■■□□□ 1.13
TRA2B-202ENST00000342294 NOM1Q5C9Z4 860 aaKnown RBP22.08■■□□□ 1.13
TRA2B-202ENST00000342294 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.13
TRA2B-202ENST00000342294 HDAC9Q9UKV0 1011 aa22.08■■□□□ 1.13
TRA2B-202ENST00000342294 UFL1O94874 794 aa22.07■■□□□ 1.12
TRA2B-202ENST00000342294 TM4SF4P48230 202 aa22.07■■□□□ 1.12
TRA2B-202ENST00000342294 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
TRA2B-202ENST00000342294 MYOZ2Q9NPC6 264 aa22.07■■□□□ 1.12
TRA2B-202ENST00000342294 SEC31BQ9NQW1 1179 aa22.07■■□□□ 1.12
TRA2B-202ENST00000342294 GGA1Q9UJY5 639 aa22.06■■□□□ 1.12
TRA2B-202ENST00000342294 G3V3G9 751 aa22.05■■□□□ 1.12
TRA2B-202ENST00000342294 UBE2Q2LH0YL09 131 aa22.05■■□□□ 1.12
TRA2B-202ENST00000342294 GPR25O00155 361 aa22.05■■□□□ 1.12
TRA2B-202ENST00000342294 USP17L8P0C7I0 530 aa22.05■■□□□ 1.12
TRA2B-202ENST00000342294 DCAF8Q5TAQ9 597 aa22.05■■□□□ 1.12
TRA2B-202ENST00000342294 HDGFL1Q5TGJ6 251 aa22.05■■□□□ 1.12
TRA2B-202ENST00000342294 DBF4Q9UBU7 674 aaPredicted RBP22.05■■□□□ 1.12
TRA2B-202ENST00000342294 HOXB7P09629 217 aa22.04■■□□□ 1.12
TRA2B-202ENST00000342294 FBXO46Q6PJ61 603 aaPredicted RBP22.04■■□□□ 1.12
TRA2B-202ENST00000342294 ANKIB1Q9P2G1 1089 aa22.04■■□□□ 1.12
TRA2B-202ENST00000342294 ZBTB38Q8NAP3 1195 aaPredicted RBP22.03■■□□□ 1.12
TRA2B-202ENST00000342294 CFHR5Q9BXR6 569 aa22.03■■□□□ 1.12
TRA2B-202ENST00000342294 SCAF8Q9UPN6 1271 aaKnown RBP22.03■■□□□ 1.12
TRA2B-202ENST00000342294 PRAMEF18Q5VWM3 479 aa22.02■■□□□ 1.12
TRA2B-202ENST00000342294 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
TRA2B-202ENST00000342294 USP17L3A6NCW0 530 aa22.01■■□□□ 1.11
TRA2B-202ENST00000342294 USP17L4A6NCW7 530 aa22.01■■□□□ 1.11
TRA2B-202ENST00000342294 USP17L1Q7RTZ2 530 aa22.01■■□□□ 1.11
TRA2B-202ENST00000342294 PODNQ7Z5L7 613 aa22.01■■□□□ 1.11
TRA2B-202ENST00000342294 NBPF9Q3BBW0 867 aa22■■□□□ 1.11
TRA2B-202ENST00000342294 GCC1Q96CN9 775 aa22■■□□□ 1.11
TRA2B-202ENST00000342294 R3HDMLQ9H3Y0 253 aa22■■□□□ 1.11
TRA2B-202ENST00000342294 PSME4Q14997 1843 aa21.99■■□□□ 1.11
TRA2B-202ENST00000342294 HSP90B1P14625 803 aaKnown RBP21.99■■□□□ 1.11
TRA2B-202ENST00000342294 TRIM35Q9UPQ4 493 aa21.99■■□□□ 1.11
TRA2B-202ENST00000342294 XDHP47989 1333 aa21.99■■□□□ 1.11
TRA2B-202ENST00000342294 FKTNO75072 461 aa21.98■■□□□ 1.11
TRA2B-202ENST00000342294 CCDC152Q4G0S7 254 aa21.98■■□□□ 1.11
TRA2B-202ENST00000342294 ATP2B4P23634 1241 aa21.97■■□□□ 1.11
TRA2B-202ENST00000342294 SREBF2Q12772 1141 aa21.97■■□□□ 1.11
TRA2B-202ENST00000342294 LAS1LQ9Y4W2 734 aaKnown RBP21.97■■□□□ 1.11
TRA2B-202ENST00000342294 WTIPA6NIX2 430 aaPredicted RBP21.96■■□□□ 1.11
TRA2B-202ENST00000342294 WNT10BO00744 389 aa21.96■■□□□ 1.11
TRA2B-202ENST00000342294 PDE8AO60658 829 aa21.96■■□□□ 1.11
TRA2B-202ENST00000342294 PCCAP05165 728 aaPredicted RBP21.96■■□□□ 1.11
TRA2B-202ENST00000342294 TTLL12Q14166 644 aaPredicted RBP21.96■■□□□ 1.11
TRA2B-202ENST00000342294 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
TRA2B-202ENST00000342294 DACT2Q5SW24 774 aa21.96■■□□□ 1.11
TRA2B-202ENST00000342294 PTPN12Q05209 780 aaKnown RBP21.95■■□□□ 1.1
TRA2B-202ENST00000342294 MKRN3Q13064 507 aaKnown RBP21.95■■□□□ 1.1
TRA2B-202ENST00000342294 DUSP27Q5VZP5 1158 aa21.95■■□□□ 1.1
TRA2B-202ENST00000342294 RIC3Q7Z5B4 369 aa21.95■■□□□ 1.1
TRA2B-202ENST00000342294 CCDC191Q8NCU4 936 aa21.95■■□□□ 1.1
TRA2B-202ENST00000342294 NF2P35240 595 aa21.94■■□□□ 1.1
TRA2B-202ENST00000342294 HABP4Q5JVS0 413 aaKnown RBP21.94■■□□□ 1.1
TRA2B-202ENST00000342294 LDLRAD1Q5T700 205 aa21.94■■□□□ 1.1
TRA2B-202ENST00000342294 ANKRD18AQ8IVF6 992 aa21.94■■□□□ 1.1
TRA2B-202ENST00000342294 MXD3Q9BW11 206 aa21.94■■□□□ 1.1
TRA2B-202ENST00000342294 CCDC85AQ96PX6 553 aaPredicted RBP21.93■■□□□ 1.1
TRA2B-202ENST00000342294 MYD88Q99836 296 aa21.93■■□□□ 1.1
TRA2B-202ENST00000342294 MED23Q9ULK4 1368 aa21.92■■□□□ 1.1
TRA2B-202ENST00000342294 GOLGA2Q08379 1002 aa21.92■■□□□ 1.1
TRA2B-202ENST00000342294 SPRYD7Q5W111 196 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms