RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 RXRAP19793 462 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 ARHGAP29Q52LW3 1261 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 PRPF38AQ8NAV1 312 aaKnown RBP8.33□□□□□ -1.08
ABCA9-201ENST00000340001 CNNM3Q8NE01 707 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 SLC26A6Q9BXS9 759 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 URB2Q14146 1524 aaKnown RBP8.33□□□□□ -1.08
ABCA9-201ENST00000340001 CHMP2AO43633 222 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 CPA1P15085 419 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 PTPN14Q15678 1187 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 TMEM266Q2M3C6 531 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC40Q4G0X9 1142 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 NUP88Q99567 741 aaPredicted RBP8.33□□□□□ -1.08
ABCA9-201ENST00000340001 PPP1R14CQ8TAE6 165 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 TBC1D32Q96NH3 1257 aa8.33□□□□□ -1.08
ABCA9-201ENST00000340001 NUCB1Q02818 461 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 CPXCR1Q8N123 301 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 CWC15Q9P013 229 aaKnown RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 FANCAO15360 1455 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 MYCLP12524 364 aaPredicted RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 GPIHBP1Q8IV16 184 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 TMX3Q96JJ7 454 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 SYCP2Q9BX26 1530 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 SMTNL1A8MU46 457 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 EEF2P13639 858 aaKnown RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 TCIRG1Q13488 830 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 C8orf34Q49A92 452 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC157Q569K6 752 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC63Q8NA47 563 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 KCNH5Q8NCM2 988 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 ACRBPQ8NEB7 543 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 TMEM67Q5HYA8 995 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 MIGA1Q8NAN2 632 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 DDX17Q92841 729 aaKnown RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 CTTNBP2Q8WZ74 1663 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 TOP1P11387 765 aaKnown RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 FERP16591 822 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 TRIM6Q9C030 488 aaPredicted RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 PFDN4Q9NQP4 134 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 ZHX1Q9UKY1 873 aaPredicted RBP8.32□□□□□ -1.08
ABCA9-201ENST00000340001 AKAP2Q9Y2D5 859 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 USP16Q9Y5T5 823 aa8.32□□□□□ -1.08
ABCA9-201ENST00000340001 ZWINTO95229 277 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 AFMP43652 599 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 TICAM2Q86XR7 235 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 ZGPATQ8N5A5 531 aaKnown RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 TSNARE1Q96NA8 513 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 PRKAG2Q9UGJ0 569 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 V9GYY5 206 aaPredicted RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 BAG3O95817 575 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 MARCKSP29966 332 aaPredicted RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 IFFO1Q0D2I5 559 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 CATIPQ7Z7H3 387 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 USP48Q86UV5 1035 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 ALS2CR12Q96Q35 445 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 PPIP5K1Q6PFW1 1433 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 SFPQP23246 707 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 FOXD4Q12950 439 aaPredicted RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 PPFIA1Q13136 1202 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 SPDYE16A6NNV3 312 aaPredicted RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 MTIF2P46199 727 aaKnown RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 EVI5LQ96CN4 794 aa8.31□□□□□ -1.08
ABCA9-201ENST00000340001 MRRFQ96E11 262 aaKnown RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 CDC5LQ99459 802 aaKnown RBP8.31□□□□□ -1.08
ABCA9-201ENST00000340001 CYP7A1P22680 504 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 ZNF397Q8NF99 534 aaPredicted RBP8.3□□□□□ -1.08
ABCA9-201ENST00000340001 PTPDC1A2A3K4 754 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 NEK1Q96PY6 1258 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 HYPKQ9NX55 129 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 ASXL1Q8IXJ9 1541 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC175P0C221 793 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 CFAP58Q5T655 872 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 Q6ZUG5 572 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 XAGE3Q8WTP9 111 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 UBXN4Q92575 508 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 BRF1Q92994 677 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 PTPRCP08575 1304 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 DNM1Q05193 864 aaKnown RBP8.3□□□□□ -1.08
ABCA9-201ENST00000340001 KIF4BQ2VIQ3 1234 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 ANO6Q4KMQ2 910 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 ANO10Q9NW15 660 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 CEP131Q9UPN4 1083 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 BIVM-ERCC5R4GMW8 1640 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 KRT9P35527 623 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms