RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PSMA5P28066 241 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 ANKRD1Q15327 319 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 CTR9Q6PD62 1173 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 EXOC4Q96A65 974 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 DDX11Q96FC9 970 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 CARD6Q9BX69 1037 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 SRRTQ9BXP5 876 aaKnown RBP10.97□□□□□ -0.65
NECAP1-201ENST00000339754 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
NECAP1-201ENST00000339754 ADAM21Q9UKJ8 722 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 CFAP45Q9UL16 551 aa10.97□□□□□ -0.65
NECAP1-201ENST00000339754 RRP15Q9Y3B9 282 aaKnown RBP10.97□□□□□ -0.65
NECAP1-201ENST00000339754 NRKQ7Z2Y5 1582 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 JAK2O60674 1132 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 ICE2Q659A1 982 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 HOMER1Q86YM7 354 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 MNS1Q8NEH6 495 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 FUT8Q9BYC5 575 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 XPO4Q9C0E2 1151 aaKnown RBP10.96□□□□□ -0.65
NECAP1-201ENST00000339754 EID1Q9Y6B2 187 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 ADAMTS13Q76LX8 1427 aa10.96□□□□□ -0.65
NECAP1-201ENST00000339754 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.66
NECAP1-201ENST00000339754 RPS6KB1P23443 525 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 STK3Q13188 491 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.66
NECAP1-201ENST00000339754 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 TMC6Q7Z403 805 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 BRF1Q92994 677 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 NUDT16Q96DE0 195 aaKnown RBP10.96□□□□□ -0.66
NECAP1-201ENST00000339754 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 ROBO2Q9HCK4 1378 aa10.96□□□□□ -0.66
NECAP1-201ENST00000339754 FER1L4A9Z1Z3 1794 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 SRGAP3O43295 1099 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 URI1O94763 535 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-201ENST00000339754 GTF2A1P52655 376 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-201ENST00000339754 EVCP57679 992 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 CEBPZQ03701 1054 aaKnown RBP10.95□□□□□ -0.66
NECAP1-201ENST00000339754 BLOC1S2Q6QNY1 142 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 NECTIN2Q92692 538 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 ERCC4Q92889 916 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-201ENST00000339754 CCDC34Q96HJ3 373 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 ZSCAN16Q9H4T2 348 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-201ENST00000339754 IFNKQ9P0W0 207 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-201ENST00000339754 PLEKHG1Q9ULL1 1385 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 ACTN2P35609 894 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 AK7Q96M32 723 aa10.95□□□□□ -0.66
NECAP1-201ENST00000339754 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-201ENST00000339754 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
NECAP1-201ENST00000339754 GPR161Q8N6U8 529 aaKnown RBP10.94□□□□□ -0.66
NECAP1-201ENST00000339754 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 FAM227BQ96M60 508 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 FTOQ9C0B1 505 aaKnown RBP eCLIP10.94□□□□□ -0.66
NECAP1-201ENST00000339754 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
NECAP1-201ENST00000339754 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 TECPR2O15040 1411 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 H3BQF6 201 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
NECAP1-201ENST00000339754 SOX12O15370 315 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 KINO60870 393 aaKnown RBP10.93□□□□□ -0.66
NECAP1-201ENST00000339754 LMAN1P49257 510 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 RSRC2Q7L4I2 434 aaKnown RBP10.93□□□□□ -0.66
NECAP1-201ENST00000339754 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 ARFGAP3Q9NP61 516 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 ECHDC1Q9NTX5 307 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 ITSN1Q15811 1721 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 FAM208AQ9UK61 1670 aaKnown RBP10.93□□□□□ -0.66
NECAP1-201ENST00000339754 CCP110O43303 1012 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 SMC2O95347 1197 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 GUCY2CP25092 1073 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 MAP3K9P80192 1104 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 NMIQ13287 307 aaPredicted RBP10.93□□□□□ -0.66
NECAP1-201ENST00000339754 DHX8Q14562 1220 aaKnown RBP10.93□□□□□ -0.66
NECAP1-201ENST00000339754 CCDC73Q6ZRK6 1079 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 EVI5LQ96CN4 794 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 BPIFA3Q9BQP9 254 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 PARD6BQ9BYG5 372 aa10.93□□□□□ -0.66
NECAP1-201ENST00000339754 H3BQV1 296 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 MAP2K7O14733 419 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 NBPF7P0C2Y1 421 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-201ENST00000339754 MMP14P50281 582 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 THEMISQ8N1K5 641 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-201ENST00000339754 CCDC61Q9Y6R9 512 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 CACNA1FO60840 1977 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 LOC102724159A0A0B4J2E5 919 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 PSME1Q06323 249 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 NCAPHQ15003 741 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 PWP2Q15269 919 aaKnown RBP10.92□□□□□ -0.66
NECAP1-201ENST00000339754 DPCR1Q3MIW9 517 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms