RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
CHGA-202ENST00000334654 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
CHGA-202ENST00000334654 TMC4Q7Z404 712 aa21.72■■□□□ 1.07
CHGA-202ENST00000334654 SP8Q8IXZ3 490 aa21.72■■□□□ 1.07
CHGA-202ENST00000334654 RWDD1Q9H446 243 aaPredicted RBP21.72■■□□□ 1.07
CHGA-202ENST00000334654 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
CHGA-202ENST00000334654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.72■■□□□ 1.07
CHGA-202ENST00000334654 GOLGB1Q14789 3259 aaKnown RBP21.72■■□□□ 1.07
CHGA-202ENST00000334654 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
CHGA-202ENST00000334654 ARFGEF1Q9Y6D6 1849 aa21.72■■□□□ 1.07
CHGA-202ENST00000334654 SASH1O94885 1247 aa21.71■■□□□ 1.07
CHGA-202ENST00000334654 DALRD3Q5D0E6 543 aaKnown RBP21.71■■□□□ 1.07
CHGA-202ENST00000334654 CNNM1Q9NRU3 951 aa21.71■■□□□ 1.07
CHGA-202ENST00000334654 VGLL2Q8N8G2 317 aa21.71■■□□□ 1.07
CHGA-202ENST00000334654 LTBP1Q14766 1721 aa21.7■■□□□ 1.06
CHGA-202ENST00000334654 IL15P40933 162 aaPredicted RBP21.7■■□□□ 1.06
CHGA-202ENST00000334654 CHRNDQ07001 517 aa21.7■■□□□ 1.06
CHGA-202ENST00000334654 G3BP1Q13283 466 aaKnown RBP eCLIP21.7■■□□□ 1.06
CHGA-202ENST00000334654 PPP4R2Q9NY27 417 aa21.7■■□□□ 1.06
CHGA-202ENST00000334654 C21orf2O43822 256 aa21.69■■□□□ 1.06
CHGA-202ENST00000334654 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
CHGA-202ENST00000334654 HELBQ8NG08 1087 aaPredicted RBP21.69■■□□□ 1.06
CHGA-202ENST00000334654 ZNF219Q9P2Y4 722 aaPredicted RBP21.69■■□□□ 1.06
CHGA-202ENST00000334654 WTIPA6NIX2 430 aaPredicted RBP21.68■■□□□ 1.06
CHGA-202ENST00000334654 GPSM2P81274 684 aa21.68■■□□□ 1.06
CHGA-202ENST00000334654 BCS1LQ9Y276 419 aa21.68■■□□□ 1.06
CHGA-202ENST00000334654 MROH5Q6ZUA9 1318 aa21.68■■□□□ 1.06
CHGA-202ENST00000334654 TFCP2Q12800 502 aa21.67■■□□□ 1.06
CHGA-202ENST00000334654 KDM2BQ8NHM5 1336 aa21.67■■□□□ 1.06
CHGA-202ENST00000334654 SNAP23O00161 211 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 RAB11FIP3O75154 756 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 TAF5LO75529 589 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 GCC1Q96CN9 775 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 PODXL2Q9NZ53 605 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 DUOX1Q9NRD9 1551 aa21.66■■□□□ 1.06
CHGA-202ENST00000334654 FER1L6Q2WGJ9 1857 aa21.65■■□□□ 1.06
CHGA-202ENST00000334654 PDE8BO95263 885 aa21.65■■□□□ 1.06
CHGA-202ENST00000334654 METTL24Q5JXM2 366 aa21.65■■□□□ 1.06
CHGA-202ENST00000334654 CC2D2BQ6DHV5 1058 aa21.65■■□□□ 1.06
CHGA-202ENST00000334654 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
CHGA-202ENST00000334654 RHPN1Q8TCX5 695 aa21.65■■□□□ 1.06
CHGA-202ENST00000334654 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.06
CHGA-202ENST00000334654 ANKRD2Q9GZV1 360 aa21.64■■□□□ 1.06
CHGA-202ENST00000334654 CEP126Q9P2H0 1117 aa21.64■■□□□ 1.06
CHGA-202ENST00000334654 APBB1O00213 710 aa21.64■■□□□ 1.05
CHGA-202ENST00000334654 YBX3P16989 372 aaKnown RBP eCLIP21.64■■□□□ 1.05
CHGA-202ENST00000334654 FGFR2P21802 821 aa21.64■■□□□ 1.05
CHGA-202ENST00000334654 OS9Q13438 667 aaPredicted RBP21.64■■□□□ 1.05
CHGA-202ENST00000334654 ERC1Q8IUD2 1116 aa21.64■■□□□ 1.05
CHGA-202ENST00000334654 POLLQ9UGP5 575 aa21.64■■□□□ 1.05
CHGA-202ENST00000334654 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
CHGA-202ENST00000334654 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.05
CHGA-202ENST00000334654 XDHP47989 1333 aa21.63■■□□□ 1.05
CHGA-202ENST00000334654 CCDC93Q567U6 631 aa21.63■■□□□ 1.05
CHGA-202ENST00000334654 MPNDQ8N594 471 aa21.63■■□□□ 1.05
CHGA-202ENST00000334654 KIF1BPQ96EK5 621 aa21.63■■□□□ 1.05
CHGA-202ENST00000334654 SMARCA5O60264 1052 aaPredicted RBP21.62■■□□□ 1.05
CHGA-202ENST00000334654 TBC1D16Q8TBP0 767 aa21.62■■□□□ 1.05
CHGA-202ENST00000334654 RTFDC1Q9BY42 306 aaPredicted RBP21.62■■□□□ 1.05
CHGA-202ENST00000334654 GPR108Q9NPR9 543 aa21.62■■□□□ 1.05
CHGA-202ENST00000334654 ANKIB1Q9P2G1 1089 aa21.62■■□□□ 1.05
CHGA-202ENST00000334654 IRS2Q9Y4H2 1338 aa21.62■■□□□ 1.05
CHGA-202ENST00000334654 SOGA3Q5TF21 947 aa21.61■■□□□ 1.05
CHGA-202ENST00000334654 LRRCC1Q9C099 1032 aa21.61■■□□□ 1.05
CHGA-202ENST00000334654 IL1RAPL2Q9NP60 686 aa21.61■■□□□ 1.05
CHGA-202ENST00000334654 LEMD3Q9Y2U8 911 aa21.61■■□□□ 1.05
CHGA-202ENST00000334654 ATP2B4P23634 1241 aa21.6■■□□□ 1.05
CHGA-202ENST00000334654 UBE4AQ14139 1066 aa21.6■■□□□ 1.05
CHGA-202ENST00000334654 GRIPAP1Q4V328 841 aa21.6■■□□□ 1.05
CHGA-202ENST00000334654 DPP8Q6V1X1 898 aaPredicted RBP21.6■■□□□ 1.05
CHGA-202ENST00000334654 RTKN2Q8IZC4 609 aa21.6■■□□□ 1.05
CHGA-202ENST00000334654 EAF2Q96CJ1 260 aaPredicted RBP21.6■■□□□ 1.05
CHGA-202ENST00000334654 ZNF804BA4D1E1 1349 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 NFKBIEO00221 500 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 TIMM10P62072 90 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 TNNI3KQ59H18 835 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 CENPQQ7L2Z9 268 aaPredicted RBP21.59■■□□□ 1.05
CHGA-202ENST00000334654 GPR101Q96P66 508 aaPredicted RBP21.59■■□□□ 1.05
CHGA-202ENST00000334654 PSMD1Q99460 953 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 TMX4Q9H1E5 349 aaPredicted RBP21.59■■□□□ 1.05
CHGA-202ENST00000334654 GGA1Q9UJY5 639 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 FPGT-TNNI3KV9GXZ4 949 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 ZNF609O15014 1411 aa21.59■■□□□ 1.05
CHGA-202ENST00000334654 UFL1O94874 794 aa21.58■■□□□ 1.05
CHGA-202ENST00000334654 KLRK1P26718 216 aa21.58■■□□□ 1.05
CHGA-202ENST00000334654 NUCB1Q02818 461 aa21.58■■□□□ 1.05
CHGA-202ENST00000334654 PUM3Q15397 648 aaKnown RBP21.58■■□□□ 1.05
CHGA-202ENST00000334654 ANKRD45Q5TZF3 282 aa21.58■■□□□ 1.05
CHGA-202ENST00000334654 TXNRD3Q86VQ6 643 aa21.58■■□□□ 1.05
CHGA-202ENST00000334654 ARAP2Q8WZ64 1704 aa21.58■■□□□ 1.04
CHGA-202ENST00000334654 A0A1B0GUL7 405 aa21.58■■□□□ 1.04
CHGA-202ENST00000334654 ATP2B3Q16720 1220 aa21.58■■□□□ 1.04
CHGA-202ENST00000334654 LPIN2Q92539 896 aa21.58■■□□□ 1.04
CHGA-202ENST00000334654 AKAP2Q9Y2D5 859 aa21.58■■□□□ 1.04
CHGA-202ENST00000334654 FKBP4Q02790 459 aaKnown RBP eCLIP21.57■■□□□ 1.04
CHGA-202ENST00000334654 C15orf52Q6ZUT6 534 aaKnown RBP21.57■■□□□ 1.04
CHGA-202ENST00000334654 LTBP3Q9NS15 1303 aa21.56■■□□□ 1.04
CHGA-202ENST00000334654 C6orf229H3BNL8 230 aa21.56■■□□□ 1.04
CHGA-202ENST00000334654 ADORA1P30542 326 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms