RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 MTHFSP49914 203 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 SLC4A8Q2Y0W8 1093 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 PHLDB3Q6NSJ2 640 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 SLF2Q8IX21 1173 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 DNAI1Q9UI46 699 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 CALCOCO2Q13137 446 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 NPHP3Q7Z494 1330 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 GOLGA8QA0A0J9YX86 632 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 GOLGA8OA6NCC3 632 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 GOLGA8NF8WBI6 632 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 NCAPGQ9BPX3 1015 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 MTIF2P46199 727 aaKnown RBP6.25□□□□□ -1.41
PTPRB-202ENST00000334414 CHMP4BP1P59074 171 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 TAF7Q15545 349 aaPredicted RBP6.25□□□□□ -1.41
PTPRB-202ENST00000334414 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 EIF2AQ9BY44 585 aaKnown RBP6.25□□□□□ -1.41
PTPRB-202ENST00000334414 CTTNBP2Q8WZ74 1663 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 HAUS8Q9BT25 410 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 CCDC65Q8IXS2 484 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 SSFA2P28290 1259 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 MATR3P43243 847 aaKnown RBP eCLIP6.25□□□□□ -1.41
PTPRB-202ENST00000334414 MCUR1Q96AQ8 359 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 CNNM2Q9H8M5 875 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 SEL1L2Q5TEA6 688 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 IQCA1Q86XH1 822 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 HOMEZQ8IX15 550 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 RPRD2Q5VT52 1461 aaKnown RBP6.25□□□□□ -1.41
PTPRB-202ENST00000334414 PTPRGP23470 1445 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 TRIM47Q96LD4 638 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 TRIM4Q9C037 500 aa6.25□□□□□ -1.41
PTPRB-202ENST00000334414 UTP11Q9Y3A2 253 aaKnown RBP6.25□□□□□ -1.41
PTPRB-202ENST00000334414 ZMYM4Q5VZL5 1548 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CFTRP13569 1480 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 NDUFAB1O14561 156 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 NBPF7P0C2Y1 421 aaPredicted RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 ZBTB16Q05516 673 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SPG7Q9UQ90 795 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 IBTKQ9P2D0 1353 aaPredicted RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SCAF11Q99590 1463 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 PSMA7O14818 248 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 VIMP08670 466 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 BRD2P25440 801 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 PRPF40BQ6NWY9 871 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CYP26C1Q6V0L0 522 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 GFM2Q969S9 779 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CAPZA3Q96KX2 299 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SPAG5Q96R06 1193 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 NUF2Q9BZD4 464 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 F13A1P00488 732 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 NUCB1Q02818 461 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 PAK2Q13177 524 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 HDGFL1Q5TGJ6 251 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CCDC68Q9H2F9 335 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 RTL9Q8NET4 1388 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 MINK1Q8N4C8 1332 aaPredicted RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 EVA1CP58658 441 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 RNASELQ05823 741 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 NAPGQ99747 312 aaPredicted RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SYNJ1O43426 1573 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CKAP2LQ8IYA6 745 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CATIPQ7Z7H3 387 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 RPAINQ86UA6 219 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 IQGAP2Q13576 1575 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 BCAR3O75815 825 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 N4BP3O15049 544 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 AKR1B10O60218 316 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 KDM4AO75164 1064 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 MCM6Q14566 821 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 CCDC152Q4G0S7 254 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 DDX27Q96GQ7 796 aaKnown RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 TTC21BQ7Z4L5 1316 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 ATP2B1P20020 1258 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SYKP43405 635 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SYCE1Q8N0S2 351 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 RUNDC3BQ96NL0 473 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SELENOSQ9BQE4 189 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 PPP1R12CQ9BZL4 782 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 SOS1Q07889 1333 aaPredicted RBP6.24□□□□□ -1.41
PTPRB-202ENST00000334414 TTC41PQ6P2S7 1318 aa6.24□□□□□ -1.41
PTPRB-202ENST00000334414 USP5P45974 858 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 DBN1Q16643 649 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 UBL4BQ8N7F7 174 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 DTNBP1Q96EV8 351 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 GDAP1L1Q96MZ0 367 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 MPHOSPH6Q99547 160 aaKnown RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 NSD3Q9BZ95 1437 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 GOLGA8BA8MQT2 603 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 I3L4J1 428 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 KRT13P13646 458 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 MIER3Q7Z3K6 550 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 BANK1Q8NDB2 785 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 LTV1Q96GA3 475 aaPredicted RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 NUCKS1Q9H1E3 243 aaKnown RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 ZHX3Q9H4I2 956 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 HAUS2Q9NVX0 235 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 GCKP35557 465 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 SRGAP1Q7Z6B7 1085 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms