RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 CCDC14Q49A88 953 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 DPP9Q86TI2 863 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 VPS36Q86VN1 386 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 APOBEC3FQ8IUX4 373 aaKnown RBP4.42□□□□□ -1.7
KNTC1-201ENST00000333479 ERO1AQ96HE7 468 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 ZHX3Q9H4I2 956 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 CCDC194A0A1B0GVG4 234 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 GPATCH4Q5T3I0 446 aaKnown RBP4.42□□□□□ -1.7
KNTC1-201ENST00000333479 LDHAL6AQ6ZMR3 332 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 ANKRD13DQ6ZTN6 518 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 BICD2Q8TD16 824 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 BICD1Q96G01 975 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 DPP7Q9UHL4 492 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 SAMM50Q9Y512 469 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 FKBP4Q02790 459 aaKnown RBP eCLIP4.42□□□□□ -1.7
KNTC1-201ENST00000333479 TMTC2Q8N394 836 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 CCDC26Q8TAB7 109 aa4.42□□□□□ -1.7
KNTC1-201ENST00000333479 F8W8V4 182 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 XPOTO43592 962 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TBCAO75347 108 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TRIM37O94972 964 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ATF7P17544 494 aaPredicted RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ZNF449Q6P9G9 518 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 RAB23Q9ULC3 237 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 GNAT1P11488 350 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 GPS2Q13227 327 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 FAM47CQ5HY64 1035 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 FMNL3Q8IVF7 1028 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 DDX12PQ92771 950 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TANGO6Q9C0B7 1094 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ERVV-2B6SEH9 535 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 KIF11P52732 1056 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 NBPF10Q6P3W6 841 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.41□□□□□ -1.72e-7■■□□□ 12
KNTC1-201ENST00000333479 GCC2Q8IWJ2 1684 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 SHROOM2Q13796 1616 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TYW5A2RUC4 315 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 MCM2P49736 904 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 MAPK8IP2Q13387 824 aaPredicted RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 JAKMIP3Q5VZ66 844 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 MCM10Q7L590 875 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 DAAM2Q86T65 1068 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 CCDC77Q9BR77 488 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ADD3Q9UEY8 706 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 RCAN3Q9UKA8 241 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TNNQ9UQP3 1299 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 DPYSL4O14531 572 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 CA12O43570 354 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 STX6O43752 255 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 SSBP05455 408 aaKnown RBP eCLIP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TSPY3P0CV98 308 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 TSPY8P0CW00 308 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 NAP1L1P55209 391 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ERFEQ4G0M1 354 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 ANKRD45Q5TZF3 282 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 LMBR1LQ6UX01 489 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 CNNM2Q9H8M5 875 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 SH3TC1Q8TE82 1336 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 YTHDC2Q9H6S0 1430 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 BMP15O95972 392 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 SLC4A2P04920 1241 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 FASTKD5Q7L8L6 764 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 CHURC1Q8WUH1 139 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 NACA2Q9H009 215 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 C14orf93Q9H972 538 aaKnown RBP4.41□□□□□ -1.7
KNTC1-201ENST00000333479 SMC3Q9UQE7 1217 aa4.41□□□□□ -1.7
KNTC1-201ENST00000333479 PHLPP2Q6ZVD8 1323 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 H0YCG3 227 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 NPR1P16066 1061 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 NAA16Q6N069 864 aaPredicted RBP4.4□□□□□ -1.7
KNTC1-201ENST00000333479 GADL1Q6ZQY3 521 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 TSNARE1Q96NA8 513 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 BABAM1Q9NWV8 329 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 TSPOAP1O95153 1857 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 ATP8B3O60423 1300 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 CCDC171Q6TFL3 1326 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 SPDYE3A6NKU9 549 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 ALDH1L1O75891 902 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 CCDC181Q5TID7 509 aa4.4□□□□□ -1.7
KNTC1-201ENST00000333479 FLT4P35916 1363 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 TSPY2A6NKD2 308 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 GCP02774 474 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 NLRP5P59047 1200 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 YAF2Q8IY57 180 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 KIAA1524Q8TCG1 905 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 EDEM3Q9BZQ6 932 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 BBOX1O75936 387 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 KCNA4P22459 653 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 GPTP24298 496 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 PPP2R5DQ14738 602 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 RABEP1Q15276 862 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 HINFPQ9BQA5 517 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 TRIM6Q9C030 488 aaPredicted RBP4.4□□□□□ -1.71
KNTC1-201ENST00000333479 ZBTB3Q9H5J0 574 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 ZBBXA8MT70 800 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 RIMBP2O15034 1052 aa4.4□□□□□ -1.71
KNTC1-201ENST00000333479 EN1Q05925 392 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms