RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 PUM3Q15397 648 aaKnown RBP19.65■□□□□ 0.74
LMNB2-201ENST00000325327 PALLDQ8WX93 1383 aa19.64■□□□□ 0.74
LMNB2-201ENST00000325327 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.74
LMNB2-201ENST00000325327 GIGYF2Q6Y7W6 1299 aaKnown RBP19.64■□□□□ 0.74
LMNB2-201ENST00000325327 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
LMNB2-201ENST00000325327 ZNF408Q9H9D4 720 aa19.64■□□□□ 0.73
LMNB2-201ENST00000325327 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.73
LMNB2-201ENST00000325327 RIMS1Q86UR5 1692 aaKnown RBP19.64■□□□□ 0.73
LMNB2-201ENST00000325327 TMEM132AQ24JP5 1023 aa19.64■□□□□ 0.73
LMNB2-201ENST00000325327 CCDC129Q6ZRS4 1044 aa19.64■□□□□ 0.73
LMNB2-201ENST00000325327 CATIPQ7Z7H3 387 aa19.64■□□□□ 0.73
LMNB2-201ENST00000325327 BEND3Q5T5X7 828 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 C2CD5Q86YS7 1000 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 NAP1L5Q96NT1 182 aaPredicted RBP19.63■□□□□ 0.73
LMNB2-201ENST00000325327 PRKG1Q13976 671 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 ZNF396Q96N95 335 aaPredicted RBP19.63■□□□□ 0.73
LMNB2-201ENST00000325327 GREM2Q9H772 168 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 CTSWP56202 376 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 MPNDQ8N594 471 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 NECAB1Q8N987 351 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 NCOA7Q8NI08 942 aa19.63■□□□□ 0.73
LMNB2-201ENST00000325327 WDR33Q9C0J8 1336 aaKnown RBP19.62■□□□□ 0.73
LMNB2-201ENST00000325327 TSPY3P0CV98 308 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 TSPY8P0CW00 308 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 LRRC24Q50LG9 513 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 ESYT1Q9BSJ8 1104 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 THRAP3Q9Y2W1 955 aaKnown RBP19.62■□□□□ 0.73
LMNB2-201ENST00000325327 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 MBD4O95243 580 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 ATG3Q9NT62 314 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 SAP30BPQ9UHR5 308 aaKnown RBP19.62■□□□□ 0.73
LMNB2-201ENST00000325327 PTPRUQ92729 1446 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 PPIP5K2O43314 1243 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 TXLNAP40222 546 aa19.62■□□□□ 0.73
LMNB2-201ENST00000325327 SERPINB2P05120 415 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 GYG1P46976 350 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 ZBTB38Q8NAP3 1195 aaPredicted RBP19.61■□□□□ 0.73
LMNB2-201ENST00000325327 FLAD1Q8NFF5 587 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 KAT14Q9H8E8 782 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 KRT85P78386 507 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 DOK7Q18PE1 504 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 CCDC196A0A1B0GTZ2 297 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 LIMCH1Q9UPQ0 1083 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 PIK3C2BO00750 1634 aa19.61■□□□□ 0.73
LMNB2-201ENST00000325327 RNF113AO15541 343 aaKnown RBP19.6■□□□□ 0.73
LMNB2-201ENST00000325327 GTF2IP78347 998 aa19.6■□□□□ 0.73
LMNB2-201ENST00000325327 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
LMNB2-201ENST00000325327 PUS3Q9BZE2 481 aaKnown RBP19.6■□□□□ 0.73
LMNB2-201ENST00000325327 SEC31BQ9NQW1 1179 aa19.6■□□□□ 0.73
LMNB2-201ENST00000325327 DHX8Q14562 1220 aaKnown RBP19.6■□□□□ 0.73
LMNB2-201ENST00000325327 C8orf76Q96K31 380 aa19.6■□□□□ 0.73
LMNB2-201ENST00000325327 HMGB1P09429 215 aaKnown RBP19.6■□□□□ 0.73
LMNB2-201ENST00000325327 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
LMNB2-201ENST00000325327 PRDM1O75626 825 aa19.6■□□□□ 0.73
LMNB2-201ENST00000325327 KLF18A0A0U1RQI7 1052 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 ZBTB7AO95365 584 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 MMP10P09238 476 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 TSR1Q2NL82 804 aaKnown RBP19.59■□□□□ 0.73
LMNB2-201ENST00000325327 NOL7Q9UMY1 257 aaKnown RBP19.59■□□□□ 0.73
LMNB2-201ENST00000325327 BLMP54132 1417 aaPredicted RBP19.59■□□□□ 0.73
LMNB2-201ENST00000325327 WDHD1O75717 1129 aaPredicted RBP19.59■□□□□ 0.73
LMNB2-201ENST00000325327 TCP10Q12799 353 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 TEX11Q8IYF3 940 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 LPIN2Q92539 896 aa19.59■□□□□ 0.73
LMNB2-201ENST00000325327 ZAP70P43403 619 aa19.58■□□□□ 0.73
LMNB2-201ENST00000325327 JMYQ8N9B5 988 aa19.58■□□□□ 0.73
LMNB2-201ENST00000325327 ZKSCAN3Q9BRR0 538 aa19.58■□□□□ 0.73
LMNB2-201ENST00000325327 HEG1Q9ULI3 1381 aa19.58■□□□□ 0.73
LMNB2-201ENST00000325327 TTC41PQ6P2S7 1318 aa19.58■□□□□ 0.73
LMNB2-201ENST00000325327 TPM2P07951 284 aa19.58■□□□□ 0.72
LMNB2-201ENST00000325327 DENND2AQ9ULE3 1009 aa19.58■□□□□ 0.72
LMNB2-201ENST00000325327 KIF24Q5T7B8 1368 aa19.58■□□□□ 0.72
LMNB2-201ENST00000325327 LMOD1P29536 600 aaPredicted RBP19.58■□□□□ 0.72
LMNB2-201ENST00000325327 WTAPQ15007 396 aa19.58■□□□□ 0.72
LMNB2-201ENST00000325327 ZMYM4Q5VZL5 1548 aa19.58■□□□□ 0.72
LMNB2-201ENST00000325327 TULP4Q9NRJ4 1543 aa19.58■□□□□ 0.72
LMNB2-201ENST00000325327 ALDH1B1P30837 517 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 MCM5P33992 734 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 PDE6BP35913 854 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 HLFQ16534 295 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 ANKRD20A12PQ8NF67 263 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 ESR2Q92731 530 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 SPATA32Q96LK8 384 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 ARMT1Q9H993 441 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 AATFQ9NY61 560 aaKnown RBP eCLIP19.57■□□□□ 0.72
LMNB2-201ENST00000325327 PCCAP05165 728 aaPredicted RBP19.57■□□□□ 0.72
LMNB2-201ENST00000325327 CPA1P15085 419 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 IARSP41252 1262 aaKnown RBP19.57■□□□□ 0.72
LMNB2-201ENST00000325327 NLRP5P59047 1200 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 ERFEQ4G0M1 354 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 SLC26A6Q9BXS9 759 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 ORC3Q9UBD5 711 aaPredicted RBP19.57■□□□□ 0.72
LMNB2-201ENST00000325327 TRAK2O60296 914 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 RXRAP19793 462 aa19.57■□□□□ 0.72
LMNB2-201ENST00000325327 DTNBO60941 627 aa19.56■□□□□ 0.72
LMNB2-201ENST00000325327 BCAMP50895 628 aa19.56■□□□□ 0.72
LMNB2-201ENST00000325327 SYNE4Q8N205 404 aa19.56■□□□□ 0.72
LMNB2-201ENST00000325327 R3HCC1Q9Y3T6 440 aaKnown RBP19.56■□□□□ 0.72
LMNB2-201ENST00000325327 METAP2P50579 478 aaKnown RBP eCLIP19.56■□□□□ 0.723e-6■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms