RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ST5P78524 1137 aa15.59■□□□□ 0.09
DDX39A-202ENST00000324340 VGLL2Q8N8G2 317 aa15.59■□□□□ 0.09
DDX39A-202ENST00000324340 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
DDX39A-202ENST00000324340 ECHDC1Q9NTX5 307 aa15.59■□□□□ 0.09
DDX39A-202ENST00000324340 A0A1B0GUL6 1792 aa15.59■□□□□ 0.09
DDX39A-202ENST00000324340 ANKRD31Q8N7Z5 1873 aa15.58■□□□□ 0.08
DDX39A-202ENST00000324340 KLRG2A4D1S0 409 aaPredicted RBP15.58■□□□□ 0.08
DDX39A-202ENST00000324340 NPHP1O15259 732 aa15.58■□□□□ 0.08
DDX39A-202ENST00000324340 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
DDX39A-202ENST00000324340 CRY2Q49AN0 593 aa15.58■□□□□ 0.08
DDX39A-202ENST00000324340 GPATCH3Q96I76 525 aa15.58■□□□□ 0.08
DDX39A-202ENST00000324340 CNNM1Q9NRU3 951 aa15.58■□□□□ 0.08
DDX39A-202ENST00000324340 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
DDX39A-202ENST00000324340 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
DDX39A-202ENST00000324340 NFKBIBQ15653 356 aa15.57■□□□□ 0.08
DDX39A-202ENST00000324340 CCDC24Q8N4L8 307 aa15.57■□□□□ 0.08
DDX39A-202ENST00000324340 MPHOSPH8Q99549 860 aa15.57■□□□□ 0.08
DDX39A-202ENST00000324340 CCDC8Q9H0W5 538 aaPredicted RBP15.57■□□□□ 0.08
DDX39A-202ENST00000324340 TLR7Q9NYK1 1049 aaKnown RBP15.57■□□□□ 0.08
DDX39A-202ENST00000324340 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
DDX39A-202ENST00000324340 DBNLQ9UJU6 430 aaKnown RBP15.57■□□□□ 0.08
DDX39A-202ENST00000324340 TAF1P21675 1872 aa15.57■□□□□ 0.08
DDX39A-202ENST00000324340 ERC2O15083 957 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 GLRX3O76003 335 aaKnown RBP15.56■□□□□ 0.08
DDX39A-202ENST00000324340 PDE8BO95263 885 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 MMP10P09238 476 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 SDSP20132 328 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 METTL24Q5JXM2 366 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 TSHZ3Q63HK5 1081 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
DDX39A-202ENST00000324340 BSDC1Q9NW68 430 aaPredicted RBP15.56■□□□□ 0.08
DDX39A-202ENST00000324340 A0A1B0GUL7 405 aa15.55■□□□□ 0.08
DDX39A-202ENST00000324340 SLC16A10Q8TF71 515 aa15.55■□□□□ 0.08
DDX39A-202ENST00000324340 BRIP1Q9BX63 1249 aa15.55■□□□□ 0.08
DDX39A-202ENST00000324340 BRPF3Q9ULD4 1205 aa15.55■□□□□ 0.08
DDX39A-202ENST00000324340 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
DDX39A-202ENST00000324340 ATP5JP18859 108 aa15.54■□□□□ 0.08
DDX39A-202ENST00000324340 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
DDX39A-202ENST00000324340 TIMM10P62072 90 aa15.54■□□□□ 0.08
DDX39A-202ENST00000324340 RPS8P62241 208 aaKnown RBP15.54■□□□□ 0.08
DDX39A-202ENST00000324340 DDX46Q7L014 1031 aaKnown RBP15.54■□□□□ 0.08
DDX39A-202ENST00000324340 CELF1Q92879 486 aaKnown RBP15.54■□□□□ 0.08
DDX39A-202ENST00000324340 DBNDD2Q9BQY9 259 aa15.54■□□□□ 0.08
DDX39A-202ENST00000324340 CDC45O75419 566 aa15.53■□□□□ 0.08
DDX39A-202ENST00000324340 FGFR2P21802 821 aa15.53■□□□□ 0.08
DDX39A-202ENST00000324340 CHRNDQ07001 517 aa15.52■□□□□ 0.08
DDX39A-202ENST00000324340 GRAPQ13588 217 aa15.52■□□□□ 0.08
DDX39A-202ENST00000324340 PUM3Q15397 648 aaKnown RBP15.52■□□□□ 0.08
DDX39A-202ENST00000324340 ATP2B3Q16720 1220 aa15.52■□□□□ 0.08
DDX39A-202ENST00000324340 MSL1Q68DK7 614 aa15.52■□□□□ 0.08
DDX39A-202ENST00000324340 GRAPLQ8TC17 118 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-202ENST00000324340 NEUROD6Q96NK8 337 aa15.52■□□□□ 0.08
DDX39A-202ENST00000324340 DAXXQ9UER7 740 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-202ENST00000324340 AK9Q5TCS8 1911 aa15.52■□□□□ 0.08
DDX39A-202ENST00000324340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.51■□□□□ 0.07
DDX39A-202ENST00000324340 LPIN2Q92539 896 aa15.51■□□□□ 0.07
DDX39A-202ENST00000324340 RPGRQ92834 1020 aaKnown RBP15.51■□□□□ 0.07
DDX39A-202ENST00000324340 XAGE2Q96GT9 111 aa15.51■□□□□ 0.07
DDX39A-202ENST00000324340 PKNOX2Q96KN3 472 aa15.51■□□□□ 0.07
DDX39A-202ENST00000324340 CRAMP1Q96RY5 1269 aa15.51■□□□□ 0.07
DDX39A-202ENST00000324340 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-202ENST00000324340 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
DDX39A-202ENST00000324340 PDE6BP35913 854 aa15.5■□□□□ 0.07
DDX39A-202ENST00000324340 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
DDX39A-202ENST00000324340 TBC1D9Q6ZT07 1266 aa15.5■□□□□ 0.07
DDX39A-202ENST00000324340 RBM17Q96I25 401 aaKnown RBP15.5■□□□□ 0.07
DDX39A-202ENST00000324340 ZNF512BQ96KM6 892 aaPredicted RBP15.5■□□□□ 0.07
DDX39A-202ENST00000324340 COL11A2P13942 1736 aaPredicted RBP15.5■□□□□ 0.07
DDX39A-202ENST00000324340 LRRC37AA6NMS7 1700 aa15.5■□□□□ 0.07
DDX39A-202ENST00000324340 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 ADORA1P30542 326 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 EVI5LQ96CN4 794 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 HAUS7Q99871 368 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 EIF5BO60841 1220 aaKnown RBP15.49■□□□□ 0.07
DDX39A-202ENST00000324340 TAF5LO75529 589 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 SEC24BO95487 1268 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 SRGNP10124 158 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 SLC5A1P13866 664 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 UBE4AQ14139 1066 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 CCDC158Q5M9N0 1113 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 HELBQ8NG08 1087 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-202ENST00000324340 ANKRD2Q9GZV1 360 aa15.49■□□□□ 0.07
DDX39A-202ENST00000324340 BBOX1O75936 387 aa15.48■□□□□ 0.07
DDX39A-202ENST00000324340 TMC4Q7Z404 712 aa15.48■□□□□ 0.07
DDX39A-202ENST00000324340 RILPL2Q969X0 211 aa15.48■□□□□ 0.07
DDX39A-202ENST00000324340 BOLA2Q9H3K6 86 aa15.48■□□□□ 0.07
DDX39A-202ENST00000324340 IFIT1P09914 478 aaKnown RBP15.47■□□□□ 0.07
DDX39A-202ENST00000324340 NPR1P16066 1061 aa15.47■□□□□ 0.07
DDX39A-202ENST00000324340 CASC1Q6TDU7 716 aa15.47■□□□□ 0.07
DDX39A-202ENST00000324340 TICAM2Q86XR7 235 aa15.47■□□□□ 0.07
DDX39A-202ENST00000324340 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
DDX39A-202ENST00000324340 KIF13BQ9NQT8 1826 aa15.46■□□□□ 0.07
DDX39A-202ENST00000324340 LTBP1Q14766 1721 aa15.46■□□□□ 0.07
DDX39A-202ENST00000324340 RFX7Q2KHR2 1363 aa15.46■□□□□ 0.07
DDX39A-202ENST00000324340 AKAP11Q9UKA4 1901 aa15.46■□□□□ 0.07
DDX39A-202ENST00000324340 MAP4K4O95819 1239 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-202ENST00000324340 CHMLP26374 656 aa15.46■□□□□ 0.07
DDX39A-202ENST00000324340 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-202ENST00000324340 GORABQ5T7V8 394 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms