RNA–Protein interactions for RNA: ENST00000316084.9

RPS4X-201, Transcript of ribosomal protein S4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS4X, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-201ENST00000316084 KRT26Q7Z3Y9 468 aa10.6□□□□□ -0.71
RPS4X-201ENST00000316084 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
RPS4X-201ENST00000316084 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
RPS4X-201ENST00000316084 ERO1AQ96HE7 468 aa10.6□□□□□ -0.71
RPS4X-201ENST00000316084 CDX2Q99626 313 aaPredicted RBP10.6□□□□□ -0.71
RPS4X-201ENST00000316084 SLC12A5Q9H2X9 1139 aa10.6□□□□□ -0.71
RPS4X-201ENST00000316084 CACNA1BQ00975 2339 aa10.6□□□□□ -0.71
RPS4X-201ENST00000316084 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
RPS4X-201ENST00000316084 EVI5O60447 810 aa10.59□□□□□ -0.71
RPS4X-201ENST00000316084 GMPSP49915 693 aaPredicted RBP10.59□□□□□ -0.71
RPS4X-201ENST00000316084 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
RPS4X-201ENST00000316084 DDX19BQ9UMR2 479 aa10.59□□□□□ -0.71
RPS4X-201ENST00000316084 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
RPS4X-201ENST00000316084 CAP1Q01518 475 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
RPS4X-201ENST00000316084 TBC1D2Q9BYX2 928 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
RPS4X-201ENST00000316084 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 AMPHP49418 695 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 PSMD1Q99460 953 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.72
RPS4X-201ENST00000316084 PTCH2Q9Y6C5 1203 aa10.58□□□□□ -0.72
RPS4X-201ENST00000316084 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
RPS4X-201ENST00000316084 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPS4X-201ENST00000316084 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
RPS4X-201ENST00000316084 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
RPS4X-201ENST00000316084 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
RPS4X-201ENST00000316084 CHMP5Q9NZZ3 219 aa10.57□□□□□ -0.72
RPS4X-201ENST00000316084 ISY1Q9ULR0 285 aaKnown RBP10.57□□□□□ -0.72
RPS4X-201ENST00000316084 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
RPS4X-201ENST00000316084 KIF20BQ96Q89 1820 aa10.57□□□□□ -0.72
RPS4X-201ENST00000316084 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
RPS4X-201ENST00000316084 ZNF646O15015 1829 aaPredicted RBP10.56□□□□□ -0.72
RPS4X-201ENST00000316084 SREBF2Q12772 1141 aa10.56□□□□□ -0.72
RPS4X-201ENST00000316084 ATF7IPQ6VMQ6 1270 aa10.56□□□□□ -0.72
RPS4X-201ENST00000316084 SMC5Q8IY18 1101 aa10.56□□□□□ -0.72
RPS4X-201ENST00000316084 ADAMTS19Q8TE59 1207 aa10.56□□□□□ -0.72
RPS4X-201ENST00000316084 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
RPS4X-201ENST00000316084 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
RPS4X-201ENST00000316084 COL15A1P39059 1388 aa10.56□□□□□ -0.72
RPS4X-201ENST00000316084 A0A1W2PP64 1363 aa10.55□□□□□ -0.72
RPS4X-201ENST00000316084 SHTN1A0MZ66 631 aa10.55□□□□□ -0.72
RPS4X-201ENST00000316084 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
RPS4X-201ENST00000316084 PTCD1O75127 700 aaKnown RBP10.55□□□□□ -0.72
RPS4X-201ENST00000316084 KRT37O76014 449 aa10.55□□□□□ -0.72
RPS4X-201ENST00000316084 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
RPS4X-201ENST00000316084 ALDH1L2Q3SY69 923 aa10.55□□□□□ -0.72
RPS4X-201ENST00000316084 SMC4Q9NTJ3 1288 aa10.55□□□□□ -0.72
RPS4X-201ENST00000316084 EIF5BO60841 1220 aaKnown RBP10.54□□□□□ -0.72
RPS4X-201ENST00000316084 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
RPS4X-201ENST00000316084 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
RPS4X-201ENST00000316084 TBC1D9BQ66K14 1250 aa10.54□□□□□ -0.72
RPS4X-201ENST00000316084 SH3TC2Q8TF17 1288 aa10.54□□□□□ -0.72
RPS4X-201ENST00000316084 UHRF1Q96T88 793 aaPredicted RBP10.54□□□□□ -0.72
RPS4X-201ENST00000316084 C22orf23Q9BZE7 217 aa10.54□□□□□ -0.72
RPS4X-201ENST00000316084 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
RPS4X-201ENST00000316084 TERF2IPQ9NYB0 399 aa10.54□□□□□ -0.72
RPS4X-201ENST00000316084 CDHR2Q9BYE9 1310 aa10.54□□□□□ -0.72
RPS4X-201ENST00000316084 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
RPS4X-201ENST00000316084 TRIM27P14373 513 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 PTMSP20962 102 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 MCM4P33991 863 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 CXCL9Q07325 125 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 SNX21Q969T3 373 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
RPS4X-201ENST00000316084 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 TNNQ9UQP3 1299 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 NPR1P16066 1061 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 FBLN1P23142 703 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
RPS4X-201ENST00000316084 EXOSC9Q06265 439 aaKnown RBP10.53□□□□□ -0.72
RPS4X-201ENST00000316084 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 CDCA5Q96FF9 252 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 BCL2L13Q9BXK5 485 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 ZDBF2Q9HCK1 2354 aa10.53□□□□□ -0.72
RPS4X-201ENST00000316084 GOLGA6L3A6NEY3 463 aa10.52□□□□□ -0.73
RPS4X-201ENST00000316084 PHKG2P15735 406 aa10.52□□□□□ -0.73
RPS4X-201ENST00000316084 MOB2Q70IA6 237 aa10.52□□□□□ -0.73
RPS4X-201ENST00000316084 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
RPS4X-201ENST00000316084 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.73
RPS4X-201ENST00000316084 ZBTB40Q9NUA8 1239 aa10.52□□□□□ -0.73
RPS4X-201ENST00000316084 CNOT7Q9UIV1 285 aaKnown RBP10.52□□□□□ -0.73
RPS4X-201ENST00000316084 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 ST5P78524 1137 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 NUCB1Q02818 461 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 CALD1Q05682 793 aaKnown RBP10.51□□□□□ -0.73
RPS4X-201ENST00000316084 MTFR1Q15390 333 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 TMEM31Q5JXX7 168 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 ITPRIPQ8IWB1 547 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
RPS4X-201ENST00000316084 DCPSQ96C86 337 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms