RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ERFEQ4G0M1 354 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 CCDC152Q4G0S7 254 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 CCDC158Q5M9N0 1113 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 GORABQ5T7V8 394 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 BICDL1Q6ZP65 573 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 KRT27Q7Z3Y8 459 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 ARHGEF1Q92888 912 aaKnown RBP26.89■■□□□ 1.9
SMAD1-201ENST00000302085 CHMP5Q9NZZ3 219 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 MED23Q9ULK4 1368 aa26.89■■□□□ 1.9
SMAD1-201ENST00000302085 CHGBP05060 677 aa26.89■■□□□ 1.89
SMAD1-201ENST00000302085 FAM196AQ6ZSG2 479 aa26.89■■□□□ 1.89
SMAD1-201ENST00000302085 LRRC4BQ9NT99 713 aa26.89■■□□□ 1.89
SMAD1-201ENST00000302085 SCN7AQ01118 1682 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 RTL9Q8NET4 1388 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 PDE8BO95263 885 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 FOXD4L1Q9NU39 408 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 LRP5O75197 1615 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 ZPR1O75312 459 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 TTC39AQ5SRH9 613 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 MAP4K1Q92918 833 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 KCNB2Q92953 911 aa26.88■■□□□ 1.89
SMAD1-201ENST00000302085 ZNF589Q86UQ0 364 aaPredicted RBP26.87■■□□□ 1.89
SMAD1-201ENST00000302085 LAMB2P55268 1798 aa26.87■■□□□ 1.89
SMAD1-201ENST00000302085 MROH5Q6ZUA9 1318 aa26.87■■□□□ 1.89
SMAD1-201ENST00000302085 BRWD3Q6RI45 1802 aa26.86■■□□□ 1.89
SMAD1-201ENST00000302085 NECTIN1Q15223 517 aa26.86■■□□□ 1.89
SMAD1-201ENST00000302085 HSP90AA1P07900 732 aaKnown RBP26.86■■□□□ 1.89
SMAD1-201ENST00000302085 C4BP0C0L5 1744 aa26.85■■□□□ 1.89
SMAD1-201ENST00000302085 PRPF40BQ6NWY9 871 aaKnown RBP26.85■■□□□ 1.89
SMAD1-201ENST00000302085 C3orf67Q6ZVT6 689 aa26.85■■□□□ 1.89
SMAD1-201ENST00000302085 HELBQ8NG08 1087 aaPredicted RBP26.85■■□□□ 1.89
SMAD1-201ENST00000302085 UPF3BQ9BZI7 483 aaKnown RBP26.85■■□□□ 1.89
SMAD1-201ENST00000302085 FRAT2O75474 233 aaPredicted RBP26.84■■□□□ 1.89
SMAD1-201ENST00000302085 SCARF1Q14162 830 aa26.84■■□□□ 1.89
SMAD1-201ENST00000302085 SLC10A5Q5PT55 438 aa26.84■■□□□ 1.89
SMAD1-201ENST00000302085 TICAM2Q86XR7 235 aa26.84■■□□□ 1.89
SMAD1-201ENST00000302085 RBM8AQ9Y5S9 174 aaKnown RBP26.84■■□□□ 1.89
SMAD1-201ENST00000302085 SETDB2Q96T68 719 aa26.84■■□□□ 1.89
SMAD1-201ENST00000302085 MPHOSPH8Q99549 860 aa26.84■■□□□ 1.89
SMAD1-201ENST00000302085 TAF5LO75529 589 aa26.83■■□□□ 1.89
SMAD1-201ENST00000302085 FGFR2P21802 821 aa26.83■■□□□ 1.89
SMAD1-201ENST00000302085 FKBP4Q02790 459 aaKnown RBP eCLIP26.83■■□□□ 1.89
SMAD1-201ENST00000302085 SF3B3Q15393 1217 aaKnown RBP26.83■■□□□ 1.89
SMAD1-201ENST00000302085 SEC62Q99442 399 aaKnown RBP26.83■■□□□ 1.89
SMAD1-201ENST00000302085 MCMDC2Q4G0Z9 681 aa26.82■■□□□ 1.88
SMAD1-201ENST00000302085 TRAPPC3LQ5T215 181 aa26.82■■□□□ 1.88
SMAD1-201ENST00000302085 ABCC12Q96J65 1359 aa26.82■■□□□ 1.88
SMAD1-201ENST00000302085 TRIM37O94972 964 aa26.82■■□□□ 1.88
SMAD1-201ENST00000302085 MCM2P49736 904 aa26.82■■□□□ 1.88
SMAD1-201ENST00000302085 PHF14O94880 888 aa26.81■■□□□ 1.88
SMAD1-201ENST00000302085 IGHMBP2P38935 993 aaKnown RBP26.81■■□□□ 1.88
SMAD1-201ENST00000302085 PUM3Q15397 648 aaKnown RBP26.81■■□□□ 1.88
SMAD1-201ENST00000302085 SLFNL1Q499Z3 407 aa26.81■■□□□ 1.88
SMAD1-201ENST00000302085 CREB3L3Q68CJ9 461 aa26.81■■□□□ 1.88
SMAD1-201ENST00000302085 CIZ1Q9ULV3 898 aaPredicted RBP26.81■■□□□ 1.88
SMAD1-201ENST00000302085 SPEF2Q9C093 1822 aa26.81■■□□□ 1.88
SMAD1-201ENST00000302085 CCDC129Q6ZRS4 1044 aa26.8■■□□□ 1.88
SMAD1-201ENST00000302085 LPIN2Q92539 896 aa26.8■■□□□ 1.88
SMAD1-201ENST00000302085 ZNF512BQ96KM6 892 aaPredicted RBP26.8■■□□□ 1.88
SMAD1-201ENST00000302085 NYXQ9GZU5 481 aa26.8■■□□□ 1.88
SMAD1-201ENST00000302085 GTF2E1P29083 439 aaPredicted RBP26.8■■□□□ 1.88
SMAD1-201ENST00000302085 RFC4P35249 363 aa26.8■■□□□ 1.88
SMAD1-201ENST00000302085 ZAP70P43403 619 aa26.8■■□□□ 1.88
SMAD1-201ENST00000302085 RBM6P78332 1123 aaKnown RBP26.8■■□□□ 1.88
SMAD1-201ENST00000302085 IL27Q8NEV9 243 aa26.8■■□□□ 1.88
SMAD1-201ENST00000302085 RNF113AO15541 343 aaKnown RBP26.79■■□□□ 1.88
SMAD1-201ENST00000302085 KCNJ4P48050 445 aa26.79■■□□□ 1.88
SMAD1-201ENST00000302085 ZMYM1Q5SVZ6 1142 aa26.79■■□□□ 1.88
SMAD1-201ENST00000302085 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
SMAD1-201ENST00000302085 HELLSQ9NRZ9 838 aa26.79■■□□□ 1.88
SMAD1-201ENST00000302085 COL4A1P02462 1669 aa26.79■■□□□ 1.88
SMAD1-201ENST00000302085 SLC27A2O14975 620 aa26.78■■□□□ 1.88
SMAD1-201ENST00000302085 NBPF5PQ86XG9 351 aaPredicted RBP26.78■■□□□ 1.88
SMAD1-201ENST00000302085 TMX3Q96JJ7 454 aa26.78■■□□□ 1.88
SMAD1-201ENST00000302085 SSFA2P28290 1259 aa26.78■■□□□ 1.88
SMAD1-201ENST00000302085 MCAMP43121 646 aa26.78■■□□□ 1.88
SMAD1-201ENST00000302085 ADCK5Q3MIX3 580 aa26.78■■□□□ 1.88
SMAD1-201ENST00000302085 PI16Q6UXB8 463 aa26.78■■□□□ 1.88
SMAD1-201ENST00000302085 SLC27A3Q5K4L6 730 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 CCDC102BQ68D86 513 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 TTC14Q96N46 770 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 CDC5LQ99459 802 aaKnown RBP26.77■■□□□ 1.88
SMAD1-201ENST00000302085 COL24A1Q17RW2 1714 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 SNAP23O00161 211 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 PHKA1P46020 1223 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 TM6SF1Q9BZW5 370 aa26.77■■□□□ 1.88
SMAD1-201ENST00000302085 ZKSCAN1P17029 563 aaPredicted RBP26.76■■□□□ 1.87
SMAD1-201ENST00000302085 TPTE2Q6XPS3 522 aa26.76■■□□□ 1.87
SMAD1-201ENST00000302085 C4AP0C0L4 1744 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 SLC5A1P13866 664 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 CPA1P15085 419 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 ADRA2BP18089 450 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 CASTP20810 708 aaKnown RBP26.75■■□□□ 1.87
SMAD1-201ENST00000302085 ARID4AP29374 1257 aaPredicted RBP26.75■■□□□ 1.87
SMAD1-201ENST00000302085 CHRNDQ07001 517 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 JAKMIP1Q96N16 626 aaKnown RBP26.75■■□□□ 1.87
SMAD1-201ENST00000302085 ZSWIM6Q9HCJ5 1215 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 AKAP11Q9UKA4 1901 aa26.75■■□□□ 1.87
SMAD1-201ENST00000302085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.74■■□□□ 1.87
SMAD1-201ENST00000302085 NOL8Q76FK4 1167 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms