RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 GNAQP50148 359 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 AFAP1Q8N556 730 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 GPR161Q8N6U8 529 aaKnown RBP12.82□□□□□ -0.36
GCN1-201ENST00000300648 NLRP5P59047 1200 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
GCN1-201ENST00000300648 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
GCN1-201ENST00000300648 ECHDC1Q9NTX5 307 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 PIK3R4Q99570 1358 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■□□□ 12.8
GCN1-201ENST00000300648 MPNDQ8N594 471 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 IQCDQ96DY2 449 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 RAD50Q92878 1312 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
GCN1-201ENST00000300648 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
GCN1-201ENST00000300648 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 SSFA2P28290 1259 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.364e-6■■■□□ 15.5
GCN1-201ENST00000300648 MIPOL1Q8TD10 442 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
GCN1-201ENST00000300648 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
GCN1-201ENST00000300648 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
GCN1-201ENST00000300648 PHLDB2Q86SQ0 1253 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 INTS4Q96HW7 963 aaKnown RBP12.81□□□□□ -0.36
GCN1-201ENST00000300648 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■■□□ 15.2
GCN1-201ENST00000300648 MAP7Q14244 749 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 SYCP3Q8IZU3 236 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 MCM6Q14566 821 aa12.81□□□□□ -0.36
GCN1-201ENST00000300648 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 BAG3O95817 575 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 MTUS1Q9ULD2 1270 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
GCN1-201ENST00000300648 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
GCN1-201ENST00000300648 SYT1P21579 422 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
GCN1-201ENST00000300648 MICALL1Q8N3F8 863 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 TTC22Q5TAA0 569 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
GCN1-201ENST00000300648 FYB2Q5VWT5 728 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 CALML3P27482 149 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 STAT6P42226 847 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 IRX4P78413 519 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 CRACR2BQ8N4Y2 399 aaPredicted RBP12.8□□□□□ -0.36
GCN1-201ENST00000300648 CCDC26Q8TAB7 109 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
GCN1-201ENST00000300648 EXOC6BQ9Y2D4 811 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
GCN1-201ENST00000300648 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
GCN1-201ENST00000300648 LDHCP07864 332 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 KRT13P13646 458 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 MFSD6Q6ZSS7 791 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 GSTO1P78417 241 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 SCLT1Q96NL6 688 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 CCDC38Q502W7 563 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 WDR78Q5VTH9 848 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 CABP1Q9NZU7 370 aa12.79□□□□□ -0.36
GCN1-201ENST00000300648 CASQ2O14958 399 aaPredicted RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 MYL6BP14649 208 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 RASSF2P50749 326 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 TXNDC16Q9P2K2 825 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 DNAI1Q9UI46 699 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
GCN1-201ENST00000300648 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 SARNPP82979 210 aaKnown RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 TRPC3Q13507 836 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 ANO6Q4KMQ2 910 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 RTL9Q8NET4 1388 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 PRC1O43663 620 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 CALCOCO2Q13137 446 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 INTS8Q75QN2 995 aaKnown RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
GCN1-201ENST00000300648 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 CCDC42Q96M95 316 aa12.78□□□□□ -0.36
GCN1-201ENST00000300648 LIG1P18858 919 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms