RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 EDC3Q96F86 508 aaKnown RBP27.73■■■□□ 2.03
PTX3-201ENST00000295927 ANO2Q9NQ90 1003 aa27.73■■■□□ 2.03
PTX3-201ENST00000295927 TNS1Q9HBL0 1735 aaKnown RBP27.72■■■□□ 2.03
PTX3-201ENST00000295927 ADORA1P30542 326 aa27.72■■■□□ 2.03
PTX3-201ENST00000295927 MPHOSPH8Q99549 860 aa27.72■■■□□ 2.03
PTX3-201ENST00000295927 FSD1Q9BTV5 496 aa27.72■■■□□ 2.03
PTX3-201ENST00000295927 NDUFB9Q9Y6M9 179 aa27.72■■■□□ 2.03
PTX3-201ENST00000295927 MROH5Q6ZUA9 1318 aa27.72■■■□□ 2.03
PTX3-201ENST00000295927 PDE8BO95263 885 aa27.71■■■□□ 2.03
PTX3-201ENST00000295927 DNAJC2Q99543 621 aaKnown RBP27.71■■■□□ 2.03
PTX3-201ENST00000295927 IGHMBP2P38935 993 aaKnown RBP27.71■■■□□ 2.03
PTX3-201ENST00000295927 NFIXQ14938 502 aa27.71■■■□□ 2.03
PTX3-201ENST00000295927 COL4A1P02462 1669 aa27.7■■■□□ 2.03
PTX3-201ENST00000295927 HIP1O00291 1037 aa27.7■■■□□ 2.02
PTX3-201ENST00000295927 TAF1P21675 1872 aa27.7■■■□□ 2.02
PTX3-201ENST00000295927 GORABQ5T7V8 394 aa27.7■■■□□ 2.02
PTX3-201ENST00000295927 CARMIL3Q8ND23 1372 aa27.7■■■□□ 2.02
PTX3-201ENST00000295927 RUFY2Q8WXA3 655 aa27.7■■■□□ 2.02
PTX3-201ENST00000295927 TBC1D2Q9BYX2 928 aa27.7■■■□□ 2.02
PTX3-201ENST00000295927 ERICH6Q7L0X2 663 aa27.69■■■□□ 2.02
PTX3-201ENST00000295927 GYS1P13807 737 aa27.69■■■□□ 2.02
PTX3-201ENST00000295927 CCDC158Q5M9N0 1113 aa27.69■■■□□ 2.02
PTX3-201ENST00000295927 CDC5LQ99459 802 aaKnown RBP27.69■■■□□ 2.02
PTX3-201ENST00000295927 IFIT1P09914 478 aaKnown RBP27.68■■■□□ 2.02
PTX3-201ENST00000295927 HELBQ8NG08 1087 aaPredicted RBP27.68■■■□□ 2.02
PTX3-201ENST00000295927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.68■■■□□ 2.02
PTX3-201ENST00000295927 CCDC24Q8N4L8 307 aa27.67■■■□□ 2.02
PTX3-201ENST00000295927 NLRP3Q96P20 1036 aa27.67■■■□□ 2.02
PTX3-201ENST00000295927 EPB41L2O43491 1005 aaKnown RBP27.67■■■□□ 2.02
PTX3-201ENST00000295927 TTC39AQ5SRH9 613 aa27.67■■■□□ 2.02
PTX3-201ENST00000295927 ARAP2Q8WZ64 1704 aa27.66■■■□□ 2.02
PTX3-201ENST00000295927 NMIQ13287 307 aaPredicted RBP27.66■■■□□ 2.02
PTX3-201ENST00000295927 DDX46Q7L014 1031 aaKnown RBP27.66■■■□□ 2.02
PTX3-201ENST00000295927 PUM3Q15397 648 aaKnown RBP27.65■■■□□ 2.02
PTX3-201ENST00000295927 ZNF827Q17R98 1081 aa27.65■■■□□ 2.02
PTX3-201ENST00000295927 FAM227BQ96M60 508 aa27.65■■■□□ 2.02
PTX3-201ENST00000295927 PAG1Q9NWQ8 432 aa27.65■■■□□ 2.02
PTX3-201ENST00000295927 RGPD3A6NKT7 1758 aaPredicted RBP27.65■■■□□ 2.02
PTX3-201ENST00000295927 RGPD4Q7Z3J3 1758 aa27.65■■■□□ 2.02
PTX3-201ENST00000295927 FGFR2P21802 821 aa27.65■■■□□ 2.02
PTX3-201ENST00000295927 RFX7Q2KHR2 1363 aa27.64■■■□□ 2.02
PTX3-201ENST00000295927 GOLIM4O00461 696 aa27.64■■■□□ 2.02
PTX3-201ENST00000295927 NPHP1O15259 732 aa27.64■■■□□ 2.02
PTX3-201ENST00000295927 ANKRD18AQ8IVF6 992 aa27.64■■■□□ 2.02
PTX3-201ENST00000295927 LPIN2Q92539 896 aa27.64■■■□□ 2.02
PTX3-201ENST00000295927 AKT1S1Q96B36 256 aa27.64■■■□□ 2.02
PTX3-201ENST00000295927 LSG1Q9H089 658 aaKnown RBP27.64■■■□□ 2.02
PTX3-201ENST00000295927 TNRC6CQ9HCJ0 1690 aaKnown RBP27.64■■■□□ 2.02
PTX3-201ENST00000295927 TAF5LO75529 589 aa27.63■■■□□ 2.01
PTX3-201ENST00000295927 MCCP23508 829 aa27.63■■■□□ 2.01
PTX3-201ENST00000295927 KBTBD3Q8NAB2 608 aa27.63■■■□□ 2.01
PTX3-201ENST00000295927 TFCP2L1Q9NZI6 479 aa27.63■■■□□ 2.01
PTX3-201ENST00000295927 KIAA1211Q6ZU35 1233 aa27.63■■■□□ 2.01
PTX3-201ENST00000295927 SNX21Q969T3 373 aa27.63■■■□□ 2.01
PTX3-201ENST00000295927 A0A1B0GUL6 1792 aa27.62■■■□□ 2.01
PTX3-201ENST00000295927 RAD50Q92878 1312 aa27.62■■■□□ 2.01
PTX3-201ENST00000295927 A0A0D9SFI3 127 aa27.62■■■□□ 2.01
PTX3-201ENST00000295927 RABEP1Q15276 862 aa27.62■■■□□ 2.01
PTX3-201ENST00000295927 CNBD1Q8NA66 436 aa27.62■■■□□ 2.01
PTX3-201ENST00000295927 TM4SF1P30408 202 aa27.61■■■□□ 2.01
PTX3-201ENST00000295927 AKAP11Q9UKA4 1901 aa27.61■■■□□ 2.01
PTX3-201ENST00000295927 CHRNDQ07001 517 aa27.61■■■□□ 2.01
PTX3-201ENST00000295927 HSCBQ8IWL3 235 aa27.61■■■□□ 2.01
PTX3-201ENST00000295927 SNRKQ9NRH2 765 aa27.61■■■□□ 2.01
PTX3-201ENST00000295927 SCARF1Q14162 830 aa27.6■■■□□ 2.01
PTX3-201ENST00000295927 CELF1Q92879 486 aaKnown RBP27.6■■■□□ 2.01
PTX3-201ENST00000295927 BSDC1Q9NW68 430 aaPredicted RBP27.6■■■□□ 2.01
PTX3-201ENST00000295927 SLC5A1P13866 664 aa27.59■■■□□ 2.01
PTX3-201ENST00000295927 FKBP4Q02790 459 aaKnown RBP eCLIP27.59■■■□□ 2.01
PTX3-201ENST00000295927 ZNF512BQ96KM6 892 aaPredicted RBP27.59■■■□□ 2.01
PTX3-201ENST00000295927 PALD1Q9ULE6 856 aa27.59■■■□□ 2.01
PTX3-201ENST00000295927 SNAP23O00161 211 aa27.59■■■□□ 2.01
PTX3-201ENST00000295927 PRR5LQ6MZQ0 368 aa27.59■■■□□ 2.01
PTX3-201ENST00000295927 ANTXR1Q9H6X2 564 aa27.59■■■□□ 2.01
PTX3-201ENST00000295927 HSPA4P34932 840 aa27.58■■■□□ 2.01
PTX3-201ENST00000295927 MED23Q9ULK4 1368 aa27.58■■■□□ 2.01
PTX3-201ENST00000295927 SERPINB2P05120 415 aa27.57■■■□□ 2
PTX3-201ENST00000295927 ANAPC15P60006 121 aa27.57■■■□□ 2
PTX3-201ENST00000295927 PTH1RQ03431 593 aa27.57■■■□□ 2
PTX3-201ENST00000295927 CCDC102BQ68D86 513 aa27.57■■■□□ 2
PTX3-201ENST00000295927 TICAM2Q86XR7 235 aa27.57■■■□□ 2
PTX3-201ENST00000295927 CHGBP05060 677 aa27.57■■■□□ 2
PTX3-201ENST00000295927 PHKA1P46020 1223 aa27.57■■■□□ 2
PTX3-201ENST00000295927 RPS8P62241 208 aaKnown RBP27.57■■■□□ 2
PTX3-201ENST00000295927 COL23A1Q86Y22 540 aaPredicted RBP27.57■■■□□ 2
PTX3-201ENST00000295927 CD2BP2O95400 341 aaKnown RBP27.56■■■□□ 2
PTX3-201ENST00000295927 MCAMP43121 646 aa27.56■■■□□ 2
PTX3-201ENST00000295927 ZAP70P43403 619 aa27.56■■■□□ 2
PTX3-201ENST00000295927 MINPP1Q9UNW1 487 aa27.55■■■□□ 2
PTX3-201ENST00000295927 CCDC171Q6TFL3 1326 aa27.55■■■□□ 2
PTX3-201ENST00000295927 ARID4AP29374 1257 aaPredicted RBP27.55■■■□□ 2
PTX3-201ENST00000295927 DDR1Q08345 913 aa27.55■■■□□ 2
PTX3-201ENST00000295927 PI16Q6UXB8 463 aa27.55■■■□□ 2
PTX3-201ENST00000295927 IL17RAQ96F46 866 aa27.55■■■□□ 2
PTX3-201ENST00000295927 UQCRFS1P1P0C7P4 283 aa27.54■■■□□ 2
PTX3-201ENST00000295927 ZNF589Q86UQ0 364 aaPredicted RBP27.54■■■□□ 2
PTX3-201ENST00000295927 FLAD1Q8NFF5 587 aa27.53■■■□□ 2
PTX3-201ENST00000295927 POLRMTO00411 1230 aaKnown RBP27.53■■■□□ 2
PTX3-201ENST00000295927 ST5P78524 1137 aa27.53■■■□□ 2
PTX3-201ENST00000295927 MYH7P12883 1935 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms