RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 GCOM1H8Y6P7 765 aaPredicted RBP17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 MYZAPP0CAP1 466 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 GOLGA1Q92805 767 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 CALML4Q96GE6 196 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 TERF1P54274 439 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 ZBTB43O43298 467 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 KANK3Q6NY19 840 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 CCDC175P0C221 793 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 OGFRQ9NZT2 677 aa17.54■□□□□ 0.4
SHROOM4-201ENST00000289292 EZRP15311 586 aaKnown RBP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 EXOC1Q9NV70 894 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 PHF8Q9UPP1 1060 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 IQSEC3Q9UPP2 1182 aaPredicted RBP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 SPTLC2O15270 562 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 XAGE3Q8WTP9 111 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 CTAGE9A4FU28 777 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 MTHFSDQ2M296 383 aaKnown RBP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 ZNF569Q5MCW4 686 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 FAM173BQ6P4H8 233 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 TSC1Q92574 1164 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 TCP11L1Q9NUJ3 509 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 A0A1B0GVL5 298 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 UBA7P41226 1012 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 WTAPQ15007 396 aa17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHROOM4-201ENST00000289292 PTPDC1A2A3K4 754 aa17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 STAT6P42226 847 aa17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 IRX3P78415 501 aaPredicted RBP17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 PRC1O43663 620 aa17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
SHROOM4-201ENST00000289292 CCDC91Q7Z6B0 441 aa17.52■□□□□ 0.39
SHROOM4-201ENST00000289292 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 CD109Q6YHK3 1445 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 ANKRD13DQ6ZTN6 518 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 AKR1B10O60218 316 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 FAM114A1Q8IWE2 563 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 IVLP07476 585 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 NF2P35240 595 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 SMC1AQ14683 1233 aaKnown RBP17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 CCDC129Q6ZRS4 1044 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 CFAP43Q8NDM7 1665 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 VGLL3A8MV65 326 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 GRM8O00222 908 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
SHROOM4-201ENST00000289292 TTC31Q49AM3 519 aaPredicted RBP17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 G2E3Q7L622 706 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 RAB34Q9BZG1 259 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 ARID5AQ03989 594 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 RTN1Q16799 776 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 CEP112Q8N8E3 955 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 CKAP4Q07065 602 aaKnown RBP17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 KRBA2Q6ZNG9 492 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 CEBPAP49715 358 aaPredicted RBP17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 PAG1Q9NWQ8 432 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
SHROOM4-201ENST00000289292 AMPD3Q01432 767 aa17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 TFCP2Q12800 502 aa17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 PLIN2Q99541 437 aa17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 CTAGE1Q96RT6 745 aa17.49■□□□□ 0.39
SHROOM4-201ENST00000289292 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 ATRIPQ8WXE1 791 aa17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 INTS4Q96HW7 963 aaKnown RBP17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 KDM5BQ9UGL1 1544 aa17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 IFIT1BQ5T764 474 aaKnown RBP17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 UBXN1Q04323 297 aa17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 LMBRD1Q9NUN5 540 aa17.48■□□□□ 0.39
SHROOM4-201ENST00000289292 ELF2Q15723 593 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 EHBP1Q8NDI1 1231 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 PPARDQ03181 441 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 HEATR3Q7Z4Q2 680 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 CYLC1P35663 651 aaPredicted RBP17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 PAIP2Q9BPZ3 127 aaKnown RBP17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 RMND1Q9NWS8 449 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 CTTNBP2Q8WZ74 1663 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 SNX14Q9Y5W7 946 aa17.47■□□□□ 0.39
SHROOM4-201ENST00000289292 CETN2P41208 172 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 CBX8Q9HC52 389 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 FANCAO15360 1455 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms