RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
GFRA3-201ENST00000274721 SPEF2Q9C093 1822 aa25.71■■□□□ 1.71
GFRA3-201ENST00000274721 GOLIM4O00461 696 aa25.71■■□□□ 1.71
GFRA3-201ENST00000274721 ATP2B3Q16720 1220 aa25.71■■□□□ 1.71
GFRA3-201ENST00000274721 TMX3Q96JJ7 454 aa25.71■■□□□ 1.71
GFRA3-201ENST00000274721 QTRT2Q9H974 415 aaKnown RBP25.71■■□□□ 1.71
GFRA3-201ENST00000274721 RBM8AQ9Y5S9 174 aaKnown RBP25.71■■□□□ 1.71
GFRA3-201ENST00000274721 TAF5LO75529 589 aa25.7■■□□□ 1.7
GFRA3-201ENST00000274721 PDE8BO95263 885 aa25.7■■□□□ 1.7
GFRA3-201ENST00000274721 RAB3GAP1Q15042 981 aa25.7■■□□□ 1.7
GFRA3-201ENST00000274721 BCL2L12Q9HB09 334 aa25.7■■□□□ 1.7
GFRA3-201ENST00000274721 LY75O60449 1722 aa25.7■■□□□ 1.7
GFRA3-201ENST00000274721 PRPF40BQ6NWY9 871 aaKnown RBP25.7■■□□□ 1.7
GFRA3-201ENST00000274721 NARFQ9UHQ1 456 aa25.7■■□□□ 1.7
GFRA3-201ENST00000274721 ABCC12Q96J65 1359 aa25.69■■□□□ 1.7
GFRA3-201ENST00000274721 TTC14Q96N46 770 aa25.69■■□□□ 1.7
GFRA3-201ENST00000274721 TM6SF1Q9BZW5 370 aa25.69■■□□□ 1.7
GFRA3-201ENST00000274721 CWC22Q9HCG8 908 aaKnown RBP25.69■■□□□ 1.7
GFRA3-201ENST00000274721 LAMB2P55268 1798 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 CCDC152Q4G0S7 254 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 MCMDC2Q4G0Z9 681 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 MROH5Q6ZUA9 1318 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 CHGBP05060 677 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 CUL4AQ13619 759 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 TTC39AQ5SRH9 613 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 GORABQ5T7V8 394 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 CREB3L3Q68CJ9 461 aa25.68■■□□□ 1.7
GFRA3-201ENST00000274721 ZNF512BQ96KM6 892 aaPredicted RBP25.68■■□□□ 1.7
GFRA3-201ENST00000274721 USPL1Q5W0Q7 1092 aa25.67■■□□□ 1.7
GFRA3-201ENST00000274721 BCL11BQ9C0K0 894 aaPredicted RBP25.67■■□□□ 1.7
GFRA3-201ENST00000274721 SEC31BQ9NQW1 1179 aa25.66■■□□□ 1.7
GFRA3-201ENST00000274721 TAF1LQ8IZX4 1826 aa25.66■■□□□ 1.7
GFRA3-201ENST00000274721 SCN7AQ01118 1682 aa25.66■■□□□ 1.7
GFRA3-201ENST00000274721 ZKSCAN1P17029 563 aaPredicted RBP25.66■■□□□ 1.7
GFRA3-201ENST00000274721 FGFR2P21802 821 aa25.66■■□□□ 1.7
GFRA3-201ENST00000274721 SMIM5Q71RC9 77 aa25.66■■□□□ 1.7
GFRA3-201ENST00000274721 HELLSQ9NRZ9 838 aa25.66■■□□□ 1.7
GFRA3-201ENST00000274721 GNPATO15228 680 aa25.65■■□□□ 1.7
GFRA3-201ENST00000274721 ADCK5Q3MIX3 580 aa25.65■■□□□ 1.7
GFRA3-201ENST00000274721 SEC62Q99442 399 aaKnown RBP25.65■■□□□ 1.7
GFRA3-201ENST00000274721 ZSWIM6Q9HCJ5 1215 aa25.65■■□□□ 1.7
GFRA3-201ENST00000274721 SLC27A2O14975 620 aa25.64■■□□□ 1.7
GFRA3-201ENST00000274721 MCM4P33991 863 aa25.64■■□□□ 1.7
GFRA3-201ENST00000274721 SCARF1Q14162 830 aa25.64■■□□□ 1.7
GFRA3-201ENST00000274721 TSGA10IPQ3SY00 556 aa25.64■■□□□ 1.7
GFRA3-201ENST00000274721 ZMYM1Q5SVZ6 1142 aa25.64■■□□□ 1.7
GFRA3-201ENST00000274721 TBC1D9BQ66K14 1250 aa25.64■■□□□ 1.7
GFRA3-201ENST00000274721 TNPO1Q92973 898 aaKnown RBP25.64■■□□□ 1.7
GFRA3-201ENST00000274721 RTCBQ9Y3I0 505 aaKnown RBP25.64■■□□□ 1.7
GFRA3-201ENST00000274721 ZGPATQ8N5A5 531 aaKnown RBP25.64■■□□□ 1.69
GFRA3-201ENST00000274721 SSFA2P28290 1259 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 KCNJ4P48050 445 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 FKBP4Q02790 459 aaKnown RBP eCLIP25.63■■□□□ 1.69
GFRA3-201ENST00000274721 SF3B3Q15393 1217 aaKnown RBP25.63■■□□□ 1.69
GFRA3-201ENST00000274721 PUM3Q15397 648 aaKnown RBP25.63■■□□□ 1.69
GFRA3-201ENST00000274721 SLC10A5Q5PT55 438 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 INTS4Q96HW7 963 aaKnown RBP25.63■■□□□ 1.69
GFRA3-201ENST00000274721 MPHOSPH8Q99549 860 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 CASTP20810 708 aaKnown RBP25.63■■□□□ 1.69
GFRA3-201ENST00000274721 ERFEQ4G0M1 354 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 RNF20Q5VTR2 975 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 AMIGO3Q86WK7 504 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 LPIN2Q92539 896 aa25.63■■□□□ 1.69
GFRA3-201ENST00000274721 RNF113AO15541 343 aaKnown RBP25.62■■□□□ 1.69
GFRA3-201ENST00000274721 JAKMIP1Q96N16 626 aaKnown RBP25.62■■□□□ 1.69
GFRA3-201ENST00000274721 HMG20BQ9P0W2 317 aa25.62■■□□□ 1.69
GFRA3-201ENST00000274721 AKAP11Q9UKA4 1901 aa25.62■■□□□ 1.69
GFRA3-201ENST00000274721 CCDC129Q6ZRS4 1044 aa25.61■■□□□ 1.69
GFRA3-201ENST00000274721 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
GFRA3-201ENST00000274721 SRP68Q9UHB9 627 aaKnown RBP25.61■■□□□ 1.69
GFRA3-201ENST00000274721 RPAP1Q9BWH6 1393 aaPredicted RBP25.61■■□□□ 1.69
GFRA3-201ENST00000274721 ZPR1O75312 459 aa25.61■■□□□ 1.69
GFRA3-201ENST00000274721 CYP2E1P05181 493 aaPredicted RBP25.61■■□□□ 1.69
GFRA3-201ENST00000274721 VPS53Q5VIR6 699 aa25.61■■□□□ 1.69
GFRA3-201ENST00000274721 MCAMP43121 646 aa25.6■■□□□ 1.69
GFRA3-201ENST00000274721 ZAP70P43403 619 aa25.6■■□□□ 1.69
GFRA3-201ENST00000274721 AK2P54819 239 aa25.6■■□□□ 1.69
GFRA3-201ENST00000274721 IGHMBP2P38935 993 aaKnown RBP25.59■■□□□ 1.69
GFRA3-201ENST00000274721 NUCB2P80303 420 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 LRRFIP1Q32MZ4 808 aaKnown RBP25.59■■□□□ 1.69
GFRA3-201ENST00000274721 SLFNL1Q499Z3 407 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 CLEC17AQ6ZS10 378 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 RUFY3Q7L099 469 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 HELBQ8NG08 1087 aaPredicted RBP25.59■■□□□ 1.69
GFRA3-201ENST00000274721 ARID4AP29374 1257 aaPredicted RBP25.59■■□□□ 1.69
GFRA3-201ENST00000274721 CCDC102BQ68D86 513 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 BICDL1Q6ZP65 573 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 SETDB2Q96T68 719 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 LRRC4BQ9NT99 713 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 CYP46A1Q9Y6A2 500 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 U3KPZ7 1027 aaPredicted RBP25.59■■□□□ 1.69
GFRA3-201ENST00000274721 C4BP0C0L5 1744 aa25.59■■□□□ 1.69
GFRA3-201ENST00000274721 ZFYP08048 801 aaPredicted RBP25.58■■□□□ 1.69
GFRA3-201ENST00000274721 CPA1P15085 419 aa25.58■■□□□ 1.69
GFRA3-201ENST00000274721 PSMA5P28066 241 aa25.58■■□□□ 1.69
GFRA3-201ENST00000274721 FAM196AQ6ZSG2 479 aa25.58■■□□□ 1.69
GFRA3-201ENST00000274721 C3orf67Q6ZVT6 689 aa25.58■■□□□ 1.69
GFRA3-201ENST00000274721 NYXQ9GZU5 481 aa25.58■■□□□ 1.69
GFRA3-201ENST00000274721 PI16Q6UXB8 463 aa25.58■■□□□ 1.68
GFRA3-201ENST00000274721 CDC5LQ99459 802 aaKnown RBP25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms