RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ZNF594Q96JF6 807 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-201ENST00000265304 RTFDC1Q9BY42 306 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-201ENST00000265304 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
SSBP1-201ENST00000265304 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
SSBP1-201ENST00000265304 MPHOSPH8Q99549 860 aa17.75■□□□□ 0.43
SSBP1-201ENST00000265304 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
SSBP1-201ENST00000265304 LTBP3Q9NS15 1303 aa17.74■□□□□ 0.43
SSBP1-201ENST00000265304 DICER1Q9UPY3 1922 aaKnown RBP17.74■□□□□ 0.43
SSBP1-201ENST00000265304 CCDC88AQ3V6T2 1871 aa17.74■□□□□ 0.43
SSBP1-201ENST00000265304 IL15P40933 162 aaPredicted RBP17.74■□□□□ 0.43
SSBP1-201ENST00000265304 IRX6P78412 446 aaPredicted RBP17.74■□□□□ 0.43
SSBP1-201ENST00000265304 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
SSBP1-201ENST00000265304 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
SSBP1-201ENST00000265304 DUOX1Q9NRD9 1551 aa17.74■□□□□ 0.43
SSBP1-201ENST00000265304 MROH5Q6ZUA9 1318 aa17.73■□□□□ 0.43
SSBP1-201ENST00000265304 LRRC24Q50LG9 513 aa17.73■□□□□ 0.43
SSBP1-201ENST00000265304 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
SSBP1-201ENST00000265304 PSMD1Q99460 953 aa17.73■□□□□ 0.43
SSBP1-201ENST00000265304 ANKRD2Q9GZV1 360 aa17.73■□□□□ 0.43
SSBP1-201ENST00000265304 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
SSBP1-201ENST00000265304 ZBTB22O15209 634 aa17.72■□□□□ 0.43
SSBP1-201ENST00000265304 C21orf2O43822 256 aa17.72■□□□□ 0.43
SSBP1-201ENST00000265304 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
SSBP1-201ENST00000265304 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
SSBP1-201ENST00000265304 C15orf52Q6ZUT6 534 aaKnown RBP17.72■□□□□ 0.43
SSBP1-201ENST00000265304 VPS33BQ9H267 617 aa17.72■□□□□ 0.43
SSBP1-201ENST00000265304 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
SSBP1-201ENST00000265304 XDHP47989 1333 aa17.72■□□□□ 0.43
SSBP1-201ENST00000265304 CHRNDQ07001 517 aa17.71■□□□□ 0.43
SSBP1-201ENST00000265304 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
SSBP1-201ENST00000265304 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
SSBP1-201ENST00000265304 GPR108Q9NPR9 543 aa17.71■□□□□ 0.43
SSBP1-201ENST00000265304 CNNM1Q9NRU3 951 aa17.71■□□□□ 0.43
SSBP1-201ENST00000265304 LEMD3Q9Y2U8 911 aa17.71■□□□□ 0.43
SSBP1-201ENST00000265304 IRS2Q9Y4H2 1338 aa17.71■□□□□ 0.42
SSBP1-201ENST00000265304 UTRNP46939 3433 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 SURF6O75683 361 aaKnown RBP17.7■□□□□ 0.42
SSBP1-201ENST00000265304 SASH1O94885 1247 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 PDE8BO95263 885 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 FGFR2P21802 821 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 MPNDQ8N594 471 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 CHD4Q14839 1912 aa17.7■□□□□ 0.42
SSBP1-201ENST00000265304 NFKBIEO00221 500 aa17.69■□□□□ 0.42
SSBP1-201ENST00000265304 NEFLP07196 543 aa17.69■□□□□ 0.42
SSBP1-201ENST00000265304 GPSM2P81274 684 aa17.69■□□□□ 0.42
SSBP1-201ENST00000265304 G3BP1Q13283 466 aaKnown RBP eCLIP17.69■□□□□ 0.42
SSBP1-201ENST00000265304 UBE4AQ14139 1066 aa17.69■□□□□ 0.42
SSBP1-201ENST00000265304 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
SSBP1-201ENST00000265304 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-201ENST00000265304 RWDD1Q9H446 243 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-201ENST00000265304 ATP2B4P23634 1241 aa17.68■□□□□ 0.42
SSBP1-201ENST00000265304 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
SSBP1-201ENST00000265304 ERC1Q8IUD2 1116 aa17.68■□□□□ 0.42
SSBP1-201ENST00000265304 TBC1D16Q8TBP0 767 aa17.68■□□□□ 0.42
SSBP1-201ENST00000265304 ARAP2Q8WZ64 1704 aa17.68■□□□□ 0.42
SSBP1-201ENST00000265304 POLLQ9UGP5 575 aa17.68■□□□□ 0.42
SSBP1-201ENST00000265304 IGHDP01880 384 aa17.67■□□□□ 0.42
SSBP1-201ENST00000265304 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
SSBP1-201ENST00000265304 SIL1Q9H173 461 aa17.67■□□□□ 0.42
SSBP1-201ENST00000265304 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
SSBP1-201ENST00000265304 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
SSBP1-201ENST00000265304 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-201ENST00000265304 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
SSBP1-201ENST00000265304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-201ENST00000265304 ZNF804BA4D1E1 1349 aa17.66■□□□□ 0.42
SSBP1-201ENST00000265304 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 RHPN1Q8TCX5 695 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 EXOC6BQ9Y2D4 811 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 PSME4Q14997 1843 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 MED23Q9ULK4 1368 aa17.65■□□□□ 0.42
SSBP1-201ENST00000265304 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
SSBP1-201ENST00000265304 TAF5LO75529 589 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 PRELPP51888 382 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 TFCP2Q12800 502 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 PUM3Q15397 648 aaKnown RBP17.64■□□□□ 0.41
SSBP1-201ENST00000265304 GPR162Q16538 588 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
SSBP1-201ENST00000265304 LPIN2Q92539 896 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 AKAP2Q9Y2D5 859 aa17.64■□□□□ 0.41
SSBP1-201ENST00000265304 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
SSBP1-201ENST00000265304 KDM2BQ8NHM5 1336 aa17.63■□□□□ 0.41
SSBP1-201ENST00000265304 FBXO33Q7Z6M2 555 aa17.62■□□□□ 0.41
SSBP1-201ENST00000265304 EYA3Q99504 573 aa17.62■□□□□ 0.41
SSBP1-201ENST00000265304 WWC3Q9ULE0 1092 aa17.62■□□□□ 0.41
SSBP1-201ENST00000265304 AKAP11Q9UKA4 1901 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 SCN9AQ15858 1988 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 SNAP23O00161 211 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 UFL1O94874 794 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-201ENST00000265304 ATP2B3Q16720 1220 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 TNNI3KQ59H18 835 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms