RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FERMT3Q86UX7 667 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 EXOC4Q96A65 974 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 ANAPC4Q9UJX5 808 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 PHACTR2O75167 634 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 CETN1Q12798 172 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 SPATS2Q86XZ4 545 aaKnown RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 KCNH5Q8NCM2 988 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 RNF216Q9NWF9 866 aaPredicted RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 MYO18AQ92614 2054 aaKnown RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 LACTBP83111 547 aaPredicted RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 TRIM21P19474 475 aaKnown RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 TRAF1Q13077 416 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 TSNAXIP1Q2TAA8 658 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 VCXQ9H320 206 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 HOOK3Q86VS8 718 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 KDM4AO75164 1064 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 ZSCAN22P10073 491 aaPredicted RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 LRRC27Q9C0I9 530 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.48□□□□□ -1.37
VCAN-201ENST00000265077 NDUFAB1O14561 156 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 CREB3O43889 395 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 IGHMBP2P38935 993 aaKnown RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 PIP4K2BP78356 416 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 CKAP2LQ8IYA6 745 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 ECHDC1Q9NTX5 307 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 BMP15O95972 392 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 SSBP05455 408 aaKnown RBP eCLIP6.47□□□□□ -1.37
VCAN-201ENST00000265077 MYL6BP14649 208 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 CABP4P57796 275 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 TNIP1Q15025 636 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 CATIPQ7Z7H3 387 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 DNAI2Q9GZS0 605 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 UGGT2Q9NYU1 1516 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 SAAL1Q96ER3 474 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 NAPBQ9H115 298 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 MTMR7Q9Y216 660 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 IBTKQ9P2D0 1353 aaPredicted RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 CCDC102BQ68D86 513 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 PAF1Q8N7H5 531 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 WHAMMQ8TF30 809 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 BOLA2Q9H3K6 86 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 GSTTP1A0A1W2PQM5 241 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 ANKRD62A6NC57 917 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 ACTN2P35609 894 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 GRIPAP1Q4V328 841 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 LUC7L2Q9Y383 392 aaKnown RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 HSF2BPO75031 334 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 PSMD2Q13200 908 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 AMOTQ4VCS5 1084 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 TADA2BQ86TJ2 420 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 EVCP57679 992 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 FBF1Q8TES7 1133 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 MYH11P35749 1972 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 KCNG4Q8TDN1 519 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 CCDC12Q8WUD4 166 aaPredicted RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 RMND1Q9NWS8 449 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 TPX2Q9ULW0 747 aaKnown RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 RANBP1P43487 201 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 SPAG1Q07617 926 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 NUTM2GQ5VZR2 741 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 INTS4Q96HW7 963 aaKnown RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 PARD3Q8TEW0 1356 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 FAM212AQ96EL1 285 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.47□□□□□ -1.37
VCAN-201ENST00000265077 SLC12A7Q9Y666 1083 aa6.47□□□□□ -1.37
VCAN-201ENST00000265077 MTIF2P46199 727 aaKnown RBP6.46□□□□□ -1.37
VCAN-201ENST00000265077 MAP3K12Q12852 859 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 CCDC6Q16204 474 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 LRP2BPQ9P2M1 347 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 DBF4Q9UBU7 674 aaPredicted RBP6.46□□□□□ -1.37
VCAN-201ENST00000265077 ZMYM4Q5VZL5 1548 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 ANKRD36BQ8N2N9 1353 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 SYKP43405 635 aa6.46□□□□□ -1.37
VCAN-201ENST00000265077 NSRP1Q9H0G5 558 aaKnown RBP6.46□□□□□ -1.37
VCAN-201ENST00000265077 GJB2P29033 226 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 MXRA7P84157 204 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 SSRP1Q08945 709 aaKnown RBP6.46□□□□□ -1.38
VCAN-201ENST00000265077 TTC21AQ8NDW8 1320 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 AMPD3Q01432 767 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.46□□□□□ -1.38
VCAN-201ENST00000265077 POLR1AO95602 1720 aaPredicted RBP6.46□□□□□ -1.38
VCAN-201ENST00000265077 CTAGE15A4D2H0 777 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 CTAGE8P0CG41 777 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 CTAGE6Q86UF2 777 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 CTAGE4Q8IX94 777 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 GBP7Q8N8V2 638 aaPredicted RBP6.46□□□□□ -1.38
VCAN-201ENST00000265077 ZNF213O14771 459 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 SMIM24O75264 130 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 MED4Q9NPJ6 270 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 FAM69CQ0P6D2 419 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 DTNBP1Q96EV8 351 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 CHCHD3Q9NX63 227 aaKnown RBP6.46□□□□□ -1.38
VCAN-201ENST00000265077 MAP7Q14244 749 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 CCDC40Q4G0X9 1142 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 TBC1D31Q96DN5 1066 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms