RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 GYS2P54840 703 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 CAVIN2O95810 425 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 NUTM1Q86Y26 1132 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
NUP54-201ENST00000264883 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.35■□□□□ 0.05
NUP54-201ENST00000264883 MMP14P50281 582 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 SLAIN2Q9P270 581 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 CYP46A1Q9Y6A2 500 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 HIP1O00291 1037 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 PDCP20941 246 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 HDGFL1Q5TGJ6 251 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 PDRG1Q9NUG6 133 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 USP16Q9Y5T5 823 aa15.34■□□□□ 0.05
NUP54-201ENST00000264883 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
NUP54-201ENST00000264883 OAS2P29728 719 aaKnown RBP15.33■□□□□ 0.04
NUP54-201ENST00000264883 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 LMOD2Q6P5Q4 547 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 SRLQ86TD4 932 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 RASEFQ8IZ41 740 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 GOLGA6L1Q8N7Z2 621 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 ATG3Q9NT62 314 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 LOC102724159A0A0B4J2E5 919 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 SRGAP3O43295 1099 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 ATP8B1O43520 1251 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 MTX1Q13505 466 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 PWP2Q15269 919 aaKnown RBP15.33■□□□□ 0.04
NUP54-201ENST00000264883 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 GOLGA5Q8TBA6 731 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 UBXN4Q92575 508 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 UBXN6Q9BZV1 441 aa15.33■□□□□ 0.04
NUP54-201ENST00000264883 ORC3Q9UBD5 711 aaPredicted RBP15.33■□□□□ 0.04
NUP54-201ENST00000264883 CPA1P15085 419 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
NUP54-201ENST00000264883 IQCB1Q15051 598 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 FAM173BQ6P4H8 233 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 FERMT3Q86UX7 667 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 FBXO18Q8NFZ0 1043 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 SCAND2PQ9GZW5 306 aaPredicted RBP15.32■□□□□ 0.04
NUP54-201ENST00000264883 ZCCHC17Q9NP64 241 aaKnown RBP15.32■□□□□ 0.04
NUP54-201ENST00000264883 RRP15Q9Y3B9 282 aaKnown RBP15.32■□□□□ 0.04
NUP54-201ENST00000264883 NCAPD2Q15021 1401 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 LARP1BQ659C4 914 aaKnown RBP15.32■□□□□ 0.04
NUP54-201ENST00000264883 AK7Q96M32 723 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 BRMS1Q9HCU9 246 aa15.32■□□□□ 0.04
NUP54-201ENST00000264883 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
NUP54-201ENST00000264883 NR1I2O75469 434 aa15.31■□□□□ 0.04
NUP54-201ENST00000264883 PSMA5P28066 241 aa15.31■□□□□ 0.04
NUP54-201ENST00000264883 ANKRD1Q15327 319 aa15.31■□□□□ 0.04
NUP54-201ENST00000264883 CAMTA1Q9Y6Y1 1673 aa15.31■□□□□ 0.04
NUP54-201ENST00000264883 SEC31AO94979 1220 aaKnown RBP15.31■□□□□ 0.04
NUP54-201ENST00000264883 CWC27Q6UX04 472 aaKnown RBP15.31■□□□□ 0.04
NUP54-201ENST00000264883 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
NUP54-201ENST00000264883 PPP1R13BQ96KQ4 1090 aa15.31■□□□□ 0.04
NUP54-201ENST00000264883 ALDH8A1Q9H2A2 487 aaPredicted RBP15.31■□□□□ 0.04
NUP54-201ENST00000264883 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
NUP54-201ENST00000264883 GSDMDP57764 484 aa15.3■□□□□ 0.04
NUP54-201ENST00000264883 GORABQ5T7V8 394 aa15.3■□□□□ 0.04
NUP54-201ENST00000264883 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
NUP54-201ENST00000264883 EVI5LQ96CN4 794 aa15.3■□□□□ 0.04
NUP54-201ENST00000264883 LTV1Q96GA3 475 aaPredicted RBP15.3■□□□□ 0.04
NUP54-201ENST00000264883 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
NUP54-201ENST00000264883 MYCBPQ99417 103 aaPredicted RBP15.3■□□□□ 0.04
NUP54-201ENST00000264883 COL18A1P39060 1754 aa15.3■□□□□ 0.04
NUP54-201ENST00000264883 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
NUP54-201ENST00000264883 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
NUP54-201ENST00000264883 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
NUP54-201ENST00000264883 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 SYTL4Q96C24 671 aaPredicted RBP15.29■□□□□ 0.04
NUP54-201ENST00000264883 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 TFIP11Q9UBB9 837 aaKnown RBP15.29■□□□□ 0.04
NUP54-201ENST00000264883 CEMIPQ8WUJ3 1361 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 NHSL1Q5SYE7 1610 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 A0A1B0GUL7 405 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 TUBB4AP04350 444 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 GUCY2CP25092 1073 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 PSEN1P49768 467 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 NBPF6Q5VWK0 638 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
NUP54-201ENST00000264883 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 NBPF4Q96M43 638 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
NUP54-201ENST00000264883 BECN2A8MW95 431 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
NUP54-201ENST00000264883 BEND3Q5T5X7 828 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 MNS1Q8NEH6 495 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 LEO1Q8WVC0 666 aaPredicted RBP15.28■□□□□ 0.04
NUP54-201ENST00000264883 NCAPGQ9BPX3 1015 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 ABCC6O95255 1503 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 RGPD5Q99666 1765 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
NUP54-201ENST00000264883 TPM1P09493 284 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms