RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 TIAM2Q8IVF5 1701 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 TLDC2A0PJX2 215 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 IPO8O15397 1037 aaKnown RBP6.9□□□□□ -1.31
ITCH-201ENST00000262650 GIGYF1O75420 1035 aaPredicted RBP6.9□□□□□ -1.31
ITCH-201ENST00000262650 VDRP11473 427 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 TBX4P57082 545 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 NLGN1Q8N2Q7 840 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 RPS6KC1Q96S38 1066 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 NUDCQ9Y266 331 aa6.9□□□□□ -1.31
ITCH-201ENST00000262650 HSP90AA1P07900 732 aaKnown RBP6.89□□□□□ -1.31
ITCH-201ENST00000262650 UTP14CQ5TAP6 766 aaKnown RBP6.89□□□□□ -1.31
ITCH-201ENST00000262650 PCGF5Q86SE9 256 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 KLF15Q9UIH9 416 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 PRR12Q9ULL5 1215 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 HDGFL1Q5TGJ6 251 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 FAM43AQ8N2R8 423 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 MYCBPQ99417 103 aaPredicted RBP6.89□□□□□ -1.31
ITCH-201ENST00000262650 LNPKQ9C0E8 428 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 PANK3Q9H999 370 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 ABCF2Q9UG63 623 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 USTQ9Y2C2 406 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 LAMB4A4D0S4 1761 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 CCDC88AQ3V6T2 1871 aa6.89□□□□□ -1.31
ITCH-201ENST00000262650 PER1O15534 1290 aaPredicted RBP6.88□□□□□ -1.31
ITCH-201ENST00000262650 HOXA2O43364 376 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 PRR29P0C7W0 189 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 HDLBPQ00341 1268 aaKnown RBP6.88□□□□□ -1.31
ITCH-201ENST00000262650 SMAPO00193 183 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 GYS1P13807 737 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 KCNA3P22001 575 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 ATP6V1AP38606 617 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 BIRC2Q13490 618 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 ITFG2Q969R8 447 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 IPO9Q96P70 1041 aaKnown RBP6.88□□□□□ -1.31
ITCH-201ENST00000262650 PDCL3Q9H2J4 239 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 MRS2Q9HD23 443 aa6.88□□□□□ -1.31
ITCH-201ENST00000262650 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
ITCH-201ENST00000262650 TM4SF1P30408 202 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 SMAP1Q8IYB5 467 aaPredicted RBP6.87□□□□□ -1.31
ITCH-201ENST00000262650 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 IGHDP01880 384 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 INTS5Q6P9B9 1019 aaKnown RBP6.87□□□□□ -1.31
ITCH-201ENST00000262650 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 ZNF512BQ96KM6 892 aaPredicted RBP6.87□□□□□ -1.31
ITCH-201ENST00000262650 TBC1D2Q9BYX2 928 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 USP42Q9H9J4 1324 aaKnown RBP6.87□□□□□ -1.31
ITCH-201ENST00000262650 KIF3CO14782 793 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 GNPATO15228 680 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 RSPH1Q8WYR4 309 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 RTCBQ9Y3I0 505 aaKnown RBP6.87□□□□□ -1.31
ITCH-201ENST00000262650 SCINQ9Y6U3 715 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 KDM3BQ7LBC6 1761 aa6.87□□□□□ -1.31
ITCH-201ENST00000262650 SOS1Q07889 1333 aaPredicted RBP6.86□□□□□ -1.31
ITCH-201ENST00000262650 TGFB3P10600 412 aa6.86□□□□□ -1.31
ITCH-201ENST00000262650 TBC1D10BQ4KMP7 808 aaPredicted RBP6.86□□□□□ -1.31
ITCH-201ENST00000262650 SDE2Q6IQ49 451 aa6.86□□□□□ -1.31
ITCH-201ENST00000262650 RASSF7Q02833 373 aa6.86□□□□□ -1.31
ITCH-201ENST00000262650 PPP4R3BQ5MIZ7 849 aa6.86□□□□□ -1.31
ITCH-201ENST00000262650 CCAR1Q8IX12 1150 aaKnown RBP6.86□□□□□ -1.31
ITCH-201ENST00000262650 LSM14AQ8ND56 463 aaKnown RBP6.86□□□□□ -1.31
ITCH-201ENST00000262650 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
ITCH-201ENST00000262650 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
ITCH-201ENST00000262650 BICDL2A1A5D9 508 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 TBC1D12O60347 775 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 COQ9O75208 318 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 MMP10P09238 476 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 PEX19P40855 299 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 B4GALNT3Q6L9W6 998 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 ZNF530Q6P9A1 599 aaPredicted RBP6.85□□□□□ -1.31
ITCH-201ENST00000262650 CEP63Q96MT8 703 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 SLC52A2Q9HAB3 445 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 CCDC87Q9NVE4 849 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 DLG5Q8TDM6 1919 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 HSPA6P17066 643 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 ARPC5LQ9BPX5 153 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 CEMIPQ8WUJ3 1361 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 PPP1R12AO14974 1030 aaPredicted RBP6.85□□□□□ -1.31
ITCH-201ENST00000262650 NAT1P18440 290 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 FLT3P36888 993 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 CRKLP46109 303 aaKnown RBP6.85□□□□□ -1.31
ITCH-201ENST00000262650 CABP4P57796 275 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 PLEKHG6Q3KR16 790 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 KRI1Q8N9T8 703 aaKnown RBP6.85□□□□□ -1.31
ITCH-201ENST00000262650 SEZ6LQ9BYH1 1024 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 RBM28Q9NW13 759 aaKnown RBP6.85□□□□□ -1.31
ITCH-201ENST00000262650 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
ITCH-201ENST00000262650 POLRMTO00411 1230 aaKnown RBP6.84□□□□□ -1.31
ITCH-201ENST00000262650 RNMTO43148 476 aaKnown RBP6.84□□□□□ -1.31
ITCH-201ENST00000262650 CYP19A1P11511 503 aaPredicted RBP6.84□□□□□ -1.31
ITCH-201ENST00000262650 MORC1Q86VD1 984 aa6.84□□□□□ -1.31
ITCH-201ENST00000262650 RANBP17Q9H2T7 1088 aaKnown RBP6.84□□□□□ -1.31
ITCH-201ENST00000262650 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
ITCH-201ENST00000262650 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.31
ITCH-201ENST00000262650 MS4A1P11836 297 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms