RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CHMP3Q9Y3E7 222 aa26.79■■□□□ 1.88
MCF2L-201ENST00000261963 FIBPO43427 364 aa26.79■■□□□ 1.88
MCF2L-201ENST00000261963 UBE2HP62256 183 aa26.79■■□□□ 1.88
MCF2L-201ENST00000261963 SEC62Q99442 399 aaKnown RBP26.79■■□□□ 1.88
MCF2L-201ENST00000261963 TJP1Q07157 1748 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 IL2RBP14784 551 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 CCDC129Q6ZRS4 1044 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 CARD10Q9BWT7 1032 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 ZBTB3Q9H5J0 574 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 PAPPAQ13219 1627 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 LETM1O95202 739 aaPredicted RBP26.78■■□□□ 1.88
MCF2L-201ENST00000261963 DNM1Q05193 864 aaKnown RBP26.78■■□□□ 1.88
MCF2L-201ENST00000261963 ANKRD1Q15327 319 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 ATP2B3Q16720 1220 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 DDX46Q7L014 1031 aaKnown RBP26.78■■□□□ 1.88
MCF2L-201ENST00000261963 MPNDQ8N594 471 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 TNS2Q63HR2 1409 aa26.78■■□□□ 1.88
MCF2L-201ENST00000261963 SPTLC3Q9NUV7 552 aa26.77■■□□□ 1.88
MCF2L-201ENST00000261963 VPS37CA5D8V6 355 aaPredicted RBP26.76■■□□□ 1.87
MCF2L-201ENST00000261963 CCDC183Q5T5S1 534 aa26.76■■□□□ 1.87
MCF2L-201ENST00000261963 CCDC191Q8NCU4 936 aa26.76■■□□□ 1.87
MCF2L-201ENST00000261963 KBTBD3Q8NAB2 608 aa26.75■■□□□ 1.87
MCF2L-201ENST00000261963 TTC12Q9H892 705 aaPredicted RBP26.75■■□□□ 1.87
MCF2L-201ENST00000261963 SLAIN2Q9P270 581 aa26.75■■□□□ 1.87
MCF2L-201ENST00000261963 USP25Q9UHP3 1055 aa26.75■■□□□ 1.87
MCF2L-201ENST00000261963 CCDC9Q9Y3X0 531 aaKnown RBP26.75■■□□□ 1.87
MCF2L-201ENST00000261963 MCMDC2Q4G0Z9 681 aa26.75■■□□□ 1.87
MCF2L-201ENST00000261963 GPR108Q9NPR9 543 aa26.75■■□□□ 1.87
MCF2L-201ENST00000261963 LARP1BQ659C4 914 aaKnown RBP26.74■■□□□ 1.87
MCF2L-201ENST00000261963 BCL2L12Q9HB09 334 aa26.74■■□□□ 1.87
MCF2L-201ENST00000261963 SHANK3Q9BYB0 1731 aa26.74■■□□□ 1.87
MCF2L-201ENST00000261963 ADCY5O95622 1261 aa26.74■■□□□ 1.87
MCF2L-201ENST00000261963 KRT32Q14532 448 aa26.74■■□□□ 1.87
MCF2L-201ENST00000261963 IL15P40933 162 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-201ENST00000261963 TIMM10P62072 90 aa26.73■■□□□ 1.87
MCF2L-201ENST00000261963 U3KPZ7 1027 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-201ENST00000261963 TPRNQ4KMQ1 711 aa26.73■■□□□ 1.87
MCF2L-201ENST00000261963 LRRC24Q50LG9 513 aa26.73■■□□□ 1.87
MCF2L-201ENST00000261963 CDC37L1Q7L3B6 337 aa26.73■■□□□ 1.87
MCF2L-201ENST00000261963 C17orf53Q8N3J3 647 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-201ENST00000261963 NEUROD6Q96NK8 337 aa26.73■■□□□ 1.87
MCF2L-201ENST00000261963 PDCL2Q8N4E4 241 aa26.72■■□□□ 1.87
MCF2L-201ENST00000261963 ZNF594Q96JF6 807 aaPredicted RBP26.72■■□□□ 1.87
MCF2L-201ENST00000261963 STRN4Q9NRL3 753 aa26.72■■□□□ 1.87
MCF2L-201ENST00000261963 SH3TC1Q8TE82 1336 aa26.72■■□□□ 1.87
MCF2L-201ENST00000261963 FAM177BA6PVY3 158 aa26.71■■□□□ 1.87
MCF2L-201ENST00000261963 EYA2O00167 538 aa26.71■■□□□ 1.87
MCF2L-201ENST00000261963 CYP21A2P08686 494 aa26.71■■□□□ 1.87
MCF2L-201ENST00000261963 NEK1Q96PY6 1258 aa26.71■■□□□ 1.87
MCF2L-201ENST00000261963 PALLDQ8WX93 1383 aa26.71■■□□□ 1.87
MCF2L-201ENST00000261963 SLFNL1Q499Z3 407 aa26.7■■□□□ 1.87
MCF2L-201ENST00000261963 GOLIM4O00461 696 aa26.7■■□□□ 1.86
MCF2L-201ENST00000261963 PAG1Q9NWQ8 432 aa26.7■■□□□ 1.86
MCF2L-201ENST00000261963 STK3Q13188 491 aa26.69■■□□□ 1.86
MCF2L-201ENST00000261963 ISCA1Q9BUE6 129 aa26.69■■□□□ 1.86
MCF2L-201ENST00000261963 ABCA3Q99758 1704 aa26.69■■□□□ 1.86
MCF2L-201ENST00000261963 PDIA4P13667 645 aaKnown RBP26.69■■□□□ 1.86
MCF2L-201ENST00000261963 PDCP20941 246 aa26.69■■□□□ 1.86
MCF2L-201ENST00000261963 FGD1P98174 961 aa26.68■■□□□ 1.86
MCF2L-201ENST00000261963 FERMT3Q86UX7 667 aa26.68■■□□□ 1.86
MCF2L-201ENST00000261963 PUS3Q9BZE2 481 aaKnown RBP26.68■■□□□ 1.86
MCF2L-201ENST00000261963 ATG3Q9NT62 314 aa26.68■■□□□ 1.86
MCF2L-201ENST00000261963 CIAO1O76071 339 aa26.67■■□□□ 1.86
MCF2L-201ENST00000261963 STOX1Q6ZVD7 989 aa26.67■■□□□ 1.86
MCF2L-201ENST00000261963 CHAF1AQ13111 956 aaPredicted RBP26.67■■□□□ 1.86
MCF2L-201ENST00000261963 GTF3C6Q969F1 213 aa26.67■■□□□ 1.86
MCF2L-201ENST00000261963 TOGARAM1Q9Y4F4 1720 aa26.67■■□□□ 1.86
MCF2L-201ENST00000261963 FAM173BQ6P4H8 233 aa26.66■■□□□ 1.86
MCF2L-201ENST00000261963 ZNF335Q9H4Z2 1342 aaPredicted RBP26.66■■□□□ 1.86
MCF2L-201ENST00000261963 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
MCF2L-201ENST00000261963 SPDYE4A6NLX3 237 aa26.66■■□□□ 1.86
MCF2L-201ENST00000261963 Q6ZUG5 572 aa26.66■■□□□ 1.86
MCF2L-201ENST00000261963 TTC6Q86TZ1 520 aa26.66■■□□□ 1.86
MCF2L-201ENST00000261963 HELLSQ9NRZ9 838 aa26.66■■□□□ 1.86
MCF2L-201ENST00000261963 A0A1B0GUL7 405 aa26.65■■□□□ 1.86
MCF2L-201ENST00000261963 TCIRG1Q13488 830 aa26.65■■□□□ 1.86
MCF2L-201ENST00000261963 ZMYM1Q5SVZ6 1142 aa26.65■■□□□ 1.86
MCF2L-201ENST00000261963 EVA1CP58658 441 aa26.65■■□□□ 1.86
MCF2L-201ENST00000261963 TMOD3Q9NYL9 352 aa26.65■■□□□ 1.86
MCF2L-201ENST00000261963 JAK2O60674 1132 aa26.64■■□□□ 1.86
MCF2L-201ENST00000261963 FUCA2Q9BTY2 467 aa26.64■■□□□ 1.86
MCF2L-201ENST00000261963 KRT85P78386 507 aa26.64■■□□□ 1.85
MCF2L-201ENST00000261963 TICAM2Q86XR7 235 aa26.64■■□□□ 1.85
MCF2L-201ENST00000261963 KDM4AO75164 1064 aa26.63■■□□□ 1.85
MCF2L-201ENST00000261963 HCLS1P14317 486 aaPredicted RBP26.63■■□□□ 1.85
MCF2L-201ENST00000261963 ANKRD7Q92527 254 aa26.63■■□□□ 1.85
MCF2L-201ENST00000261963 DSCC1Q9BVC3 393 aa26.63■■□□□ 1.85
MCF2L-201ENST00000261963 IFIT1P09914 478 aaKnown RBP26.63■■□□□ 1.85
MCF2L-201ENST00000261963 GIMAP6Q6P9H5 292 aa26.62■■□□□ 1.85
MCF2L-201ENST00000261963 LRRC2Q9BYS8 371 aa26.62■■□□□ 1.85
MCF2L-201ENST00000261963 ASAP1Q9ULH1 1129 aa26.62■■□□□ 1.85
MCF2L-201ENST00000261963 STRCQ7RTU9 1775 aa26.62■■□□□ 1.85
MCF2L-201ENST00000261963 RIOK3O14730 519 aaKnown RBP26.61■■□□□ 1.85
MCF2L-201ENST00000261963 TRIM28Q13263 835 aaKnown RBP26.61■■□□□ 1.85
MCF2L-201ENST00000261963 DNAJC10Q8IXB1 793 aa26.61■■□□□ 1.85
MCF2L-201ENST00000261963 ZNF330Q9Y3S2 320 aaPredicted RBP26.61■■□□□ 1.85
MCF2L-201ENST00000261963 ELP1O95163 1332 aa26.61■■□□□ 1.85
MCF2L-201ENST00000261963 KIAA1524Q8TCG1 905 aa26.61■■□□□ 1.85
MCF2L-201ENST00000261963 PIGBQ92521 554 aa26.61■■□□□ 1.85
MCF2L-201ENST00000261963 TPM3P06753 285 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms