RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.2
CUX2-201ENST00000261726 ATRIPQ8WXE1 791 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 RAPGEF3O95398 923 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 TPD52P55327 224 aaPredicted RBP16.27■□□□□ 0.19
CUX2-201ENST00000261726 WTAPQ15007 396 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 MAP7D1Q3KQU3 841 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 NECAB1Q8N987 351 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 NGLY1Q96IV0 654 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.19
CUX2-201ENST00000261726 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.19
CUX2-201ENST00000261726 ZBTB16Q05516 673 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 PICALMQ13492 652 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 CALM1P0DP23 149 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 CALM2P0DP24 149 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 CALM3P0DP25 149 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 IFIT1BQ5T764 474 aaKnown RBP16.26■□□□□ 0.19
CUX2-201ENST00000261726 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
CUX2-201ENST00000261726 TTC12Q9H892 705 aaPredicted RBP16.26■□□□□ 0.19
CUX2-201ENST00000261726 KLF18A0A0U1RQI7 1052 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 SH3BP5O60239 455 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 NAP1L3Q99457 506 aaPredicted RBP16.26■□□□□ 0.19
CUX2-201ENST00000261726 MCM6Q14566 821 aa16.26■□□□□ 0.19
CUX2-201ENST00000261726 RFC4P35249 363 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 PLCB3Q01970 1234 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 PLS1Q14651 629 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 SAMD9Q5K651 1589 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 ITSN2Q9NZM3 1697 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 EXOC5O00471 708 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 CTAGE15A4D2H0 777 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 CTAGE8P0CG41 777 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 CTAGE6Q86UF2 777 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 CTAGE4Q8IX94 777 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 SMC6Q96SB8 1091 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 IQSEC3Q9UPP2 1182 aaPredicted RBP16.25■□□□□ 0.19
CUX2-201ENST00000261726 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
CUX2-201ENST00000261726 UBE2HP62256 183 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 TCHPQ9BT92 498 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 FLIIQ13045 1269 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 LRSAM1Q6UWE0 723 aa16.25■□□□□ 0.19
CUX2-201ENST00000261726 ST5P78524 1137 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 USP37Q86T82 979 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 CAPZA3Q96KX2 299 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 ODF2LQ9ULJ1 636 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 NBPF7P0C2Y1 421 aaPredicted RBP16.24■□□□□ 0.19
CUX2-201ENST00000261726 MCM5P33992 734 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 DNAI1Q9UI46 699 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 PAXBP1Q9Y5B6 917 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 PLEKHH2Q8IVE3 1493 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
CUX2-201ENST00000261726 ASIC1P78348 528 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 GSTO1P78417 241 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 CCDC77Q9BR77 488 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 MARCKSP29966 332 aaPredicted RBP16.23■□□□□ 0.19
CUX2-201ENST00000261726 SLC4A4Q9Y6R1 1079 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 IMPG2Q9BZV3 1241 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 CTAGE1Q96RT6 745 aa16.23■□□□□ 0.19
CUX2-201ENST00000261726 CYP7A1P22680 504 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 FAM13AO94988 1023 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 FOXO3O43524 673 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 BRF1Q92994 677 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
CUX2-201ENST00000261726 ATP10BO94823 1461 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 ZBTB43O43298 467 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 SMARCC2Q8TAQ2 1214 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 CNPY2Q9Y2B0 182 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 NAPAP54920 295 aa16.22■□□□□ 0.19
CUX2-201ENST00000261726 DISP1Q96F81 1524 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 SMC1BQ8NDV3 1235 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 RTN1Q16799 776 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 CCDC25Q86WR0 208 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 NBPF5PQ86XG9 351 aaPredicted RBP16.21■□□□□ 0.19
CUX2-201ENST00000261726 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 ATP2A1O14983 1001 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 ANKS4BQ8N8V4 417 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 CCDC129Q6ZRS4 1044 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 AOPEPQ8N6M6 819 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 TCEANC2Q96MN5 208 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 PTPRCP08575 1304 aa16.21■□□□□ 0.19
CUX2-201ENST00000261726 TACC1O75410 805 aa16.21■□□□□ 0.18
CUX2-201ENST00000261726 DHX58Q96C10 678 aa16.21■□□□□ 0.18
CUX2-201ENST00000261726 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.18
CUX2-201ENST00000261726 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 KRT23Q9C075 422 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 ZSCAN16Q9H4T2 348 aaPredicted RBP16.2■□□□□ 0.18
CUX2-201ENST00000261726 TXNDC16Q9P2K2 825 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 ARFGAP3Q9NP61 516 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 HMG20BQ9P0W2 317 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 SKILP12757 684 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms