RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NLRP2Q9NX02 1062 aa7.35□□□□□ -1.23
TOPBP1-201ENST00000260810 USP21Q9UK80 565 aa7.35□□□□□ -1.23
TOPBP1-201ENST00000260810 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
TOPBP1-201ENST00000260810 PPP1R42Q7Z4L9 355 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 LRRC15Q8TF66 581 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 FRMPD3Q5JV73 1810 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 ARID2Q68CP9 1835 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 ATP8B2P98198 1209 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 DZIP1LQ8IYY4 767 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 DDX54Q8TDD1 881 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 YDJCA8MPS7 323 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 ZBTB22O15209 634 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 NPY5RQ15761 445 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 KSR2Q6VAB6 950 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 NUTM1Q86Y26 1132 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 GPR101Q96P66 508 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 GPHNQ9NQX3 736 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 TSPYL4Q9UJ04 414 aa7.34□□□□□ -1.23
TOPBP1-201ENST00000260810 PLSCR1O15162 318 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 SIAH1Q8IUQ4 282 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 FAM217BQ9NTX9 383 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 LOXHD1Q8IVV2 1947 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 SDSP20132 328 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 PTPRCP08575 1304 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 MAP3K15Q6ZN16 1313 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 CT47B1P0C2W7 299 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 MCAMP43121 646 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 SLC10A5Q5PT55 438 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 DNAJC18Q9H819 358 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 GNAI1P63096 354 aa7.33□□□□□ -1.24
TOPBP1-201ENST00000260810 ANK1P16157 1881 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 A0A0D9SFI3 127 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 NUTM2BA6NNL0 878 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 NUTM2EB1AL46 878 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 NUTM2AQ8IVF1 878 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 TBC1D2BQ9UPU7 963 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 ADGRG4Q8IZF6 3080 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 MYL6BP14649 208 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 AMOTQ4VCS5 1084 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 EPB41L4AQ9HCS5 686 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 COPRSQ9NQ92 184 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 TRIM37O94972 964 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 CTDNEP1O95476 244 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 TOM1L2Q6ZVM7 507 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 LSG1Q9H089 658 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 ALPK3Q96L96 1907 aa7.32□□□□□ -1.24
TOPBP1-201ENST00000260810 PPP4R2Q9NY27 417 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 CPA1P15085 419 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 ERFEQ4G0M1 354 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 NOVP48745 357 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 USPL1Q5W0Q7 1092 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 FAM227BQ96M60 508 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 POLLQ9UGP5 575 aa7.31□□□□□ -1.24
TOPBP1-201ENST00000260810 TCIRG1Q13488 830 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 CELSR1Q9NYQ6 3014 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 TIMM10P62072 90 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 TBC1D32Q96NH3 1257 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 CUBNO60494 3623 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 SALL1Q9NSC2 1324 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 PDE1AP54750 535 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 ANTXR2P58335 489 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 GAS2L2Q8NHY3 880 aa7.3□□□□□ -1.24
TOPBP1-201ENST00000260810 NECTIN1Q15223 517 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 HDGFL1Q5TGJ6 251 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 PRR5LQ6MZQ0 368 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 SH3BP5LQ7L8J4 393 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 MXD3Q9BW11 206 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 ASTN2O75129 1339 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 POTEFA5A3E0 1075 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 UPF1Q92900 1129 aaKnown RBP eCLIP7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 ZBTB3Q9H5J0 574 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 PLBD2Q8NHP8 589 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 SMC4Q9NTJ3 1288 aa7.29□□□□□ -1.24
TOPBP1-201ENST00000260810 NKRFO15226 690 aaKnown RBP eCLIP7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 NGEFQ8N5V2 710 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 ADD1P35611 737 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 DNAAF4Q8WXU2 420 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 CDHR2Q9BYE9 1310 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 GRM8O00222 908 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 LINS1Q8NG48 757 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 AGXT2Q9BYV1 514 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 DBNDD2Q9BQY9 259 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 USP26Q9BXU7 913 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 THSD7BQ9C0I4 1608 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 TXNRD1Q16881 649 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 OSBP2Q969R2 916 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 GMLQ99445 158 aa7.28□□□□□ -1.24
TOPBP1-201ENST00000260810 ZNF469Q96JG9 3925 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-201ENST00000260810 COL4A6Q14031 1691 aa7.27□□□□□ -1.25
TOPBP1-201ENST00000260810 SLC4A3P48751 1232 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms