RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 PALLDQ8WX93 1383 aa19.42■□□□□ 0.7
HOXD3-201ENST00000249440 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
HOXD3-201ENST00000249440 NBPF14Q5TI25 921 aa19.42■□□□□ 0.7
HOXD3-201ENST00000249440 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
HOXD3-201ENST00000249440 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
HOXD3-201ENST00000249440 HELLSQ9NRZ9 838 aa19.42■□□□□ 0.7
HOXD3-201ENST00000249440 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
HOXD3-201ENST00000249440 CHGBP05060 677 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 IL15P40933 162 aaPredicted RBP19.41■□□□□ 0.7
HOXD3-201ENST00000249440 PLCB2Q00722 1185 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 PAG1Q9NWQ8 432 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 LIG1P18858 919 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 FGD1P98174 961 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 ATG9AQ7Z3C6 839 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 LEO1Q8WVC0 666 aaPredicted RBP19.41■□□□□ 0.7
HOXD3-201ENST00000249440 PIBF1Q8WXW3 757 aa19.41■□□□□ 0.7
HOXD3-201ENST00000249440 TFIP11Q9UBB9 837 aaKnown RBP19.41■□□□□ 0.7
HOXD3-201ENST00000249440 PCDH11XQ9BZA7 1347 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 PCDH11YQ9BZA8 1340 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 TOM1O60784 492 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 H3BQV1 296 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 JAK2O60674 1132 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 FAM200AQ8TCP9 573 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 ZNF830Q96NB3 372 aaPredicted RBP19.4■□□□□ 0.7
HOXD3-201ENST00000249440 TNMDQ9H2S6 317 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 ZSCAN16Q9H4T2 348 aaPredicted RBP19.4■□□□□ 0.7
HOXD3-201ENST00000249440 DDX19AQ9NUU7 478 aaKnown RBP19.4■□□□□ 0.7
HOXD3-201ENST00000249440 DACT1Q9NYF0 836 aa19.4■□□□□ 0.7
HOXD3-201ENST00000249440 COL16A1Q07092 1604 aaPredicted RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 UQCRHLA0A096LP55 91 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 ERVV-2B6SEH9 535 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 GOLIM4O00461 696 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 UQCRHP07919 91 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 NUP188Q5SRE5 1749 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 DHX32Q7L7V1 743 aaKnown RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 MPNDQ8N594 471 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 CCDC191Q8NCU4 936 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 UBE2Q2Q8WVN8 375 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 BRF1Q92994 677 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 LLPHQ9BRT6 129 aaKnown RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 DSCC1Q9BVC3 393 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 CCDC9Q9Y3X0 531 aaKnown RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 LAMA4Q16363 1823 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 AHDC1Q5TGY3 1603 aaPredicted RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 TIMM10P62072 90 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 CAMK4Q16566 473 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 TTLL7Q6ZT98 887 aa19.39■□□□□ 0.69
HOXD3-201ENST00000249440 ZCRB1Q8TBF4 217 aaKnown RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 TTC12Q9H892 705 aaPredicted RBP19.39■□□□□ 0.69
HOXD3-201ENST00000249440 UBR2Q8IWV8 1755 aa19.38■□□□□ 0.69
HOXD3-201ENST00000249440 TPM3P06753 285 aa19.38■□□□□ 0.69
HOXD3-201ENST00000249440 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
HOXD3-201ENST00000249440 CFAP45Q9UL16 551 aa19.38■□□□□ 0.69
HOXD3-201ENST00000249440 TYRO3Q06418 890 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 SCRN1Q12765 414 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 NOLC1Q14978 699 aaKnown RBP eCLIP19.37■□□□□ 0.69
HOXD3-201ENST00000249440 DNTTIP2Q5QJE6 756 aaKnown RBP19.37■□□□□ 0.69
HOXD3-201ENST00000249440 EYA2O00167 538 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 PFKFB2O60825 505 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 RESTQ13127 1097 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 SMARCC2Q8TAQ2 1214 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 PDCL3Q9H2J4 239 aa19.37■□□□□ 0.69
HOXD3-201ENST00000249440 GOLGA6L6A8MZA4 724 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 GLIPR1L2Q4G1C9 344 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 ZMYM1Q5SVZ6 1142 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 STOX1Q6ZVD7 989 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 MRVI1Q9Y6F6 885 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 TJP1Q07157 1748 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 CIAO1O76071 339 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 A1BGP04217 495 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 RBM43Q6ZSC3 357 aaKnown RBP19.36■□□□□ 0.69
HOXD3-201ENST00000249440 DDX11Q96FC9 970 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 LRRC2Q9BYS8 371 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 KIF3AQ9Y496 699 aa19.36■□□□□ 0.69
HOXD3-201ENST00000249440 AP5Z1O43299 807 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
HOXD3-201ENST00000249440 TOM1L2Q6ZVM7 507 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 BICD2Q8TD16 824 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 CLSTN2Q9H4D0 955 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 DYNC1I1O14576 645 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 HMGN5P82970 282 aaKnown RBP19.35■□□□□ 0.69
HOXD3-201ENST00000249440 CKAP2LQ8IYA6 745 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 ZBTB3Q9H5J0 574 aa19.35■□□□□ 0.69
HOXD3-201ENST00000249440 A0A1B0GUL7 405 aa19.34■□□□□ 0.69
HOXD3-201ENST00000249440 HSPD1P10809 573 aaKnown RBP19.34■□□□□ 0.69
HOXD3-201ENST00000249440 LRRC24Q50LG9 513 aa19.34■□□□□ 0.69
HOXD3-201ENST00000249440 PGBD1Q96JS3 809 aa19.34■□□□□ 0.69
HOXD3-201ENST00000249440 AGXT2Q9BYV1 514 aa19.34■□□□□ 0.69
HOXD3-201ENST00000249440 RNF113AO15541 343 aaKnown RBP19.34■□□□□ 0.69
HOXD3-201ENST00000249440 EXOSC10Q01780 885 aaKnown RBP19.34■□□□□ 0.69
HOXD3-201ENST00000249440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.34■□□□□ 0.69
HOXD3-201ENST00000249440 NKX1-1Q15270 411 aaPredicted RBP19.33■□□□□ 0.69
HOXD3-201ENST00000249440 NAA16Q6N069 864 aaPredicted RBP19.33■□□□□ 0.69
HOXD3-201ENST00000249440 NSUN7Q8NE18 718 aaKnown RBP19.33■□□□□ 0.69
HOXD3-201ENST00000249440 CHMP4CQ96CF2 233 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms