RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PLA2G12BQ9BX93 195 aa26.84■■□□□ 1.89
HCFC1R1-201ENST00000248089 PODXL2Q9NZ53 605 aa26.84■■□□□ 1.89
HCFC1R1-201ENST00000248089 GMPSP49915 693 aaPredicted RBP26.83■■□□□ 1.89
HCFC1R1-201ENST00000248089 DOK7Q18PE1 504 aa26.83■■□□□ 1.89
HCFC1R1-201ENST00000248089 MRPL50Q8N5N7 158 aaKnown RBP26.83■■□□□ 1.89
HCFC1R1-201ENST00000248089 TNIP1Q15025 636 aa26.82■■□□□ 1.88
HCFC1R1-201ENST00000248089 MIER1Q8N108 512 aa26.82■■□□□ 1.88
HCFC1R1-201ENST00000248089 BCL2L13Q9BXK5 485 aa26.82■■□□□ 1.88
HCFC1R1-201ENST00000248089 XDHP47989 1333 aa26.82■■□□□ 1.88
HCFC1R1-201ENST00000248089 SCN9AQ15858 1988 aa26.81■■□□□ 1.88
HCFC1R1-201ENST00000248089 ECE2O60344 883 aa26.81■■□□□ 1.88
HCFC1R1-201ENST00000248089 ITGA6P23229 1130 aa26.81■■□□□ 1.88
HCFC1R1-201ENST00000248089 ZC3H12CQ9C0D7 883 aaKnown RBP26.81■■□□□ 1.88
HCFC1R1-201ENST00000248089 G3V3G9 751 aa26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 IGHMBP2P38935 993 aaKnown RBP26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 DCAF8Q5TAQ9 597 aa26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 SSH1Q8WYL5 1049 aa26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 SRCIN1Q9C0H9 1055 aa26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 BSDC1Q9NW68 430 aaPredicted RBP26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 GPRC5DQ9NZD1 345 aa26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 CHMP3Q9Y3E7 222 aa26.8■■□□□ 1.88
HCFC1R1-201ENST00000248089 GRM8O00222 908 aa26.79■■□□□ 1.88
HCFC1R1-201ENST00000248089 DNAJC5GQ8N7S2 189 aa26.79■■□□□ 1.88
HCFC1R1-201ENST00000248089 C9orf78Q9NZ63 289 aaPredicted RBP26.79■■□□□ 1.88
HCFC1R1-201ENST00000248089 A0A1B0GUL6 1792 aa26.79■■□□□ 1.88
HCFC1R1-201ENST00000248089 ALDH1L1O75891 902 aa26.78■■□□□ 1.88
HCFC1R1-201ENST00000248089 MAP1SQ66K74 1059 aaPredicted RBP26.78■■□□□ 1.88
HCFC1R1-201ENST00000248089 PSME4Q14997 1843 aa26.78■■□□□ 1.88
HCFC1R1-201ENST00000248089 PTPRCP08575 1304 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 PSMD14O00487 310 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 CSF1RP07333 972 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 ATP2B4P23634 1241 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 MPHOSPH8Q99549 860 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 SMC4Q9NTJ3 1288 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 MINPP1Q9UNW1 487 aa26.77■■□□□ 1.88
HCFC1R1-201ENST00000248089 FOXO4P98177 505 aa26.76■■□□□ 1.87
HCFC1R1-201ENST00000248089 USP50Q70EL3 339 aaPredicted RBP26.76■■□□□ 1.87
HCFC1R1-201ENST00000248089 TRMT2AQ8IZ69 625 aaKnown RBP26.76■■□□□ 1.87
HCFC1R1-201ENST00000248089 ADARB2Q9NS39 739 aaKnown RBP26.76■■□□□ 1.87
HCFC1R1-201ENST00000248089 ANKRD18BA2A2Z9 1011 aa26.75■■□□□ 1.87
HCFC1R1-201ENST00000248089 CNTROBQ8N137 903 aa26.75■■□□□ 1.87
HCFC1R1-201ENST00000248089 KLRG1Q96E93 195 aa26.75■■□□□ 1.87
HCFC1R1-201ENST00000248089 KCNQ5Q9NR82 932 aa26.75■■□□□ 1.87
HCFC1R1-201ENST00000248089 ZBTB12Q9Y330 459 aaPredicted RBP26.75■■□□□ 1.87
HCFC1R1-201ENST00000248089 PASKQ96RG2 1323 aa26.74■■□□□ 1.87
HCFC1R1-201ENST00000248089 ALDH1L2Q3SY69 923 aa26.74■■□□□ 1.87
HCFC1R1-201ENST00000248089 WTIPA6NIX2 430 aaPredicted RBP26.73■■□□□ 1.87
HCFC1R1-201ENST00000248089 IFIT5Q13325 482 aaKnown RBP26.73■■□□□ 1.87
HCFC1R1-201ENST00000248089 EPHA10Q5JZY3 1008 aa26.73■■□□□ 1.87
HCFC1R1-201ENST00000248089 LMBR1LQ6UX01 489 aa26.73■■□□□ 1.87
HCFC1R1-201ENST00000248089 SHTN1A0MZ66 631 aa26.72■■□□□ 1.87
HCFC1R1-201ENST00000248089 ITGBL1O95965 494 aaPredicted RBP26.72■■□□□ 1.87
HCFC1R1-201ENST00000248089 CCT4P50991 539 aaKnown RBP26.72■■□□□ 1.87
HCFC1R1-201ENST00000248089 MICALL2Q8IY33 904 aa26.72■■□□□ 1.87
HCFC1R1-201ENST00000248089 CNOT7Q9UIV1 285 aaKnown RBP26.72■■□□□ 1.87
HCFC1R1-201ENST00000248089 MED23Q9ULK4 1368 aa26.71■■□□□ 1.87
HCFC1R1-201ENST00000248089 TRPM7Q96QT4 1865 aa26.71■■□□□ 1.87
HCFC1R1-201ENST00000248089 CREBZFQ9NS37 354 aa26.71■■□□□ 1.87
HCFC1R1-201ENST00000248089 H7C1D1 291 aa26.7■■□□□ 1.86
HCFC1R1-201ENST00000248089 CT47B1P0C2W7 299 aaPredicted RBP26.7■■□□□ 1.86
HCFC1R1-201ENST00000248089 TAF7LQ5H9L4 462 aa26.7■■□□□ 1.86
HCFC1R1-201ENST00000248089 SUCLG2Q96I99 432 aa26.7■■□□□ 1.86
HCFC1R1-201ENST00000248089 ANKRD2Q9GZV1 360 aa26.7■■□□□ 1.86
HCFC1R1-201ENST00000248089 NBPF7P0C2Y1 421 aaPredicted RBP26.69■■□□□ 1.86
HCFC1R1-201ENST00000248089 CCDC57Q2TAC2 916 aa26.69■■□□□ 1.86
HCFC1R1-201ENST00000248089 TRPM4Q8TD43 1214 aa26.69■■□□□ 1.86
HCFC1R1-201ENST00000248089 RPS12P25398 132 aaKnown RBP26.68■■□□□ 1.86
HCFC1R1-201ENST00000248089 KCNJ4P48050 445 aa26.68■■□□□ 1.86
HCFC1R1-201ENST00000248089 CHRNDQ07001 517 aa26.68■■□□□ 1.86
HCFC1R1-201ENST00000248089 DPF2Q92785 391 aa26.68■■□□□ 1.86
HCFC1R1-201ENST00000248089 ZNF804BA4D1E1 1349 aa26.67■■□□□ 1.86
HCFC1R1-201ENST00000248089 ZNF594Q96JF6 807 aaPredicted RBP26.67■■□□□ 1.86
HCFC1R1-201ENST00000248089 LEMD3Q9Y2U8 911 aa26.67■■□□□ 1.86
HCFC1R1-201ENST00000248089 ZNF646O15015 1829 aaPredicted RBP26.67■■□□□ 1.86
HCFC1R1-201ENST00000248089 TMEM88BA6NKF7 163 aa26.66■■□□□ 1.86
HCFC1R1-201ENST00000248089 HNRNPUQ00839 825 aaKnown RBP eCLIP26.66■■□□□ 1.86
HCFC1R1-201ENST00000248089 MKRN1Q9UHC7 482 aaKnown RBP26.66■■□□□ 1.86
HCFC1R1-201ENST00000248089 UTYO14607 1347 aa26.65■■□□□ 1.86
HCFC1R1-201ENST00000248089 PCNTO95613 3336 aa26.65■■□□□ 1.86
HCFC1R1-201ENST00000248089 VIL1P09327 827 aaKnown RBP26.65■■□□□ 1.86
HCFC1R1-201ENST00000248089 SAMD7Q7Z3H4 446 aa26.65■■□□□ 1.86
HCFC1R1-201ENST00000248089 KLRK1P26718 216 aa26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 HIRAP54198 1017 aaPredicted RBP26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 FMR1Q06787 632 aaKnown RBP eCLIP26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 TBC1D10BQ4KMP7 808 aaPredicted RBP26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 PODNQ7Z5L7 613 aa26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 HELBQ8NG08 1087 aaPredicted RBP26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 FBXW7Q969H0 707 aa26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 KAZALD1Q96I82 304 aa26.64■■□□□ 1.86
HCFC1R1-201ENST00000248089 TRAF5O00463 557 aa26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 TAF5LO75529 589 aa26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 RSBN1LQ6PCB5 846 aaPredicted RBP26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 TXNRD3Q86VQ6 643 aa26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 BICC1Q9H694 974 aaKnown RBP26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 CNNM1Q9NRU3 951 aa26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 NOB1Q9ULX3 412 aaKnown RBP26.63■■□□□ 1.85
HCFC1R1-201ENST00000248089 POLR2AP24928 1970 aaKnown RBP26.62■■□□□ 1.85
HCFC1R1-201ENST00000248089 USP17L3A6NCW0 530 aa26.62■■□□□ 1.85
HCFC1R1-201ENST00000248089 USP17L4A6NCW7 530 aa26.62■■□□□ 1.85
HCFC1R1-201ENST00000248089 RBM26Q5T8P6 1007 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms