RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 PSMD1Q99460 953 aa11.05□□□□□ -0.64
CRIPT-201ENST00000238892 NAP1L2Q9ULW6 460 aaPredicted RBP11.05□□□□□ -0.64
CRIPT-201ENST00000238892 NIP7Q9Y221 180 aaKnown RBP eCLIP11.05□□□□□ -0.64
CRIPT-201ENST00000238892 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
CRIPT-201ENST00000238892 CACNA1SQ13698 1873 aa11.05□□□□□ -0.64
CRIPT-201ENST00000238892 ZNF500O60304 480 aaPredicted RBP11.05□□□□□ -0.64
CRIPT-201ENST00000238892 IARSP41252 1262 aaKnown RBP11.05□□□□□ -0.64
CRIPT-201ENST00000238892 RGMBQ6NW40 437 aa11.05□□□□□ -0.64
CRIPT-201ENST00000238892 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
CRIPT-201ENST00000238892 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
CRIPT-201ENST00000238892 KCNQ3O43525 872 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 TRPA1O75762 1119 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 KIF6Q6ZMV9 814 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 JDP2Q8WYK2 163 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
CRIPT-201ENST00000238892 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
CRIPT-201ENST00000238892 ADARB2Q9NS39 739 aaKnown RBP11.04□□□□□ -0.64
CRIPT-201ENST00000238892 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 CDHR2Q9BYE9 1310 aa11.04□□□□□ -0.64
CRIPT-201ENST00000238892 A0A1W2PPC1 479 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 MSNP26038 577 aaKnown RBP11.03□□□□□ -0.64
CRIPT-201ENST00000238892 HUNKP57058 714 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 KIF23Q02241 960 aaPredicted RBP11.03□□□□□ -0.64
CRIPT-201ENST00000238892 HS1BP3Q53T59 392 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 PGAP2Q9UHJ9 254 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
CRIPT-201ENST00000238892 CRY2Q49AN0 593 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
CRIPT-201ENST00000238892 MAP3K15Q6ZN16 1313 aa11.02□□□□□ -0.65
CRIPT-201ENST00000238892 FAM155AB1AL88 458 aaPredicted RBP11.02□□□□□ -0.65
CRIPT-201ENST00000238892 PARP10Q53GL7 1025 aa11.02□□□□□ -0.65
CRIPT-201ENST00000238892 MCM10Q7L590 875 aa11.02□□□□□ -0.65
CRIPT-201ENST00000238892 TRMT2AQ8IZ69 625 aaKnown RBP11.02□□□□□ -0.65
CRIPT-201ENST00000238892 TMX4Q9H1E5 349 aaPredicted RBP11.02□□□□□ -0.65
CRIPT-201ENST00000238892 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
CRIPT-201ENST00000238892 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 HOXA10P31260 410 aaPredicted RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 FMR1Q06787 632 aaKnown RBP eCLIP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 RPGRQ92834 1020 aaKnown RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 PAPPA2Q9BXP8 1791 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 KIF20AO95235 890 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 SLFN5Q08AF3 891 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 SKOR2Q2VWA4 1001 aaPredicted RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 SYNE4Q8N205 404 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 IPO4Q8TEX9 1081 aaKnown RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 RBM17Q96I25 401 aaKnown RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 CRAMP1Q96RY5 1269 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 TMEM51Q9NW97 253 aa11.01□□□□□ -0.65
CRIPT-201ENST00000238892 NOL7Q9UMY1 257 aaKnown RBP11.01□□□□□ -0.65
CRIPT-201ENST00000238892 KDM3BQ7LBC6 1761 aa11□□□□□ -0.65
CRIPT-201ENST00000238892 SLC10A3P09131 477 aa11□□□□□ -0.65
CRIPT-201ENST00000238892 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
CRIPT-201ENST00000238892 PPP1R42Q7Z4L9 355 aa11□□□□□ -0.65
CRIPT-201ENST00000238892 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
CRIPT-201ENST00000238892 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
CRIPT-201ENST00000238892 GTPBP4Q9BZE4 634 aaKnown RBP11□□□□□ -0.65
CRIPT-201ENST00000238892 ZNF277Q9NRM2 450 aaPredicted RBP11□□□□□ -0.65
CRIPT-201ENST00000238892 SCNN1DP51172 638 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 EIF4A1P60842 406 aaKnown RBP10.99□□□□□ -0.65
CRIPT-201ENST00000238892 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 GPR153Q6NV75 609 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 COL25A1Q9BXS0 654 aaPredicted RBP10.99□□□□□ -0.65
CRIPT-201ENST00000238892 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 SNED1Q8TER0 1413 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 PTMSP20962 102 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 C2orf69Q8N8R5 385 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 TNPO1Q92973 898 aaKnown RBP10.99□□□□□ -0.65
CRIPT-201ENST00000238892 CLUAP1Q96AJ1 413 aa10.99□□□□□ -0.65
CRIPT-201ENST00000238892 CHMP4BQ9H444 224 aaKnown RBP10.99□□□□□ -0.65
CRIPT-201ENST00000238892 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
CRIPT-201ENST00000238892 SASS6Q6UVJ0 657 aa10.98□□□□□ -0.65
CRIPT-201ENST00000238892 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
CRIPT-201ENST00000238892 ZIC5Q96T25 663 aa10.98□□□□□ -0.65
CRIPT-201ENST00000238892 ADAMTS8Q9UP79 889 aa10.98□□□□□ -0.65
CRIPT-201ENST00000238892 PRAMEF22A3QJZ6 481 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 LETM1O95202 739 aaPredicted RBP10.97□□□□□ -0.65
CRIPT-201ENST00000238892 EPS15P42566 896 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 HLFQ16534 295 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
CRIPT-201ENST00000238892 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 ZNF34Q8IZ26 560 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 ARID3AQ99856 593 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
CRIPT-201ENST00000238892 ZNF157P51786 506 aaPredicted RBP10.97□□□□□ -0.65
CRIPT-201ENST00000238892 RAB3GAP1Q15042 981 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 ZNF296Q8WUU4 475 aaPredicted RBP10.97□□□□□ -0.65
CRIPT-201ENST00000238892 GLIS2Q9BZE0 524 aaPredicted RBP10.97□□□□□ -0.65
CRIPT-201ENST00000238892 ZNF408Q9H9D4 720 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
CRIPT-201ENST00000238892 PPEF1O14829 653 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms