RNA–Protein interactions for RNA: ENST00000237014.7

TTR-201, Transcript of transthyretin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTR, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-201ENST00000237014 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
TTR-201ENST00000237014 SYNE4Q8N205 404 aa9.43□□□□□ -0.9
TTR-201ENST00000237014 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
TTR-201ENST00000237014 MASTLQ96GX5 879 aa9.43□□□□□ -0.9
TTR-201ENST00000237014 ISCA1Q9BUE6 129 aa9.43□□□□□ -0.9
TTR-201ENST00000237014 NYXQ9GZU5 481 aa9.43□□□□□ -0.9
TTR-201ENST00000237014 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
TTR-201ENST00000237014 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 C21orf2O43822 256 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 NPR1P16066 1061 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 DSG2Q14126 1118 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 OLFM4Q6UX06 510 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 G2E3Q7L622 706 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 DICER1Q9UPY3 1922 aaKnown RBP9.42□□□□□ -0.9
TTR-201ENST00000237014 TAF1P21675 1872 aa9.42□□□□□ -0.9
TTR-201ENST00000237014 CACNA1FO60840 1977 aa9.41□□□□□ -0.9
TTR-201ENST00000237014 VAMP4O75379 141 aa9.41□□□□□ -0.9
TTR-201ENST00000237014 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
TTR-201ENST00000237014 EXOSC9Q06265 439 aaKnown RBP9.41□□□□□ -0.9
TTR-201ENST00000237014 HSP90AB3PQ58FF7 597 aa9.41□□□□□ -0.9
TTR-201ENST00000237014 CCDC30Q5VVM6 783 aa9.41□□□□□ -0.9
TTR-201ENST00000237014 PPP1R42Q7Z4L9 355 aa9.41□□□□□ -0.9
TTR-201ENST00000237014 CNKSR1Q969H4 720 aa9.41□□□□□ -0.9
TTR-201ENST00000237014 UTP14AQ9BVJ6 771 aaKnown RBP9.41□□□□□ -0.9
TTR-201ENST00000237014 RNF123Q5XPI4 1314 aa9.4□□□□□ -0.9
TTR-201ENST00000237014 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
TTR-201ENST00000237014 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
TTR-201ENST00000237014 SLC10A5Q5PT55 438 aa9.4□□□□□ -0.9
TTR-201ENST00000237014 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
TTR-201ENST00000237014 ZNF526Q8TF50 670 aaPredicted RBP9.4□□□□□ -0.9
TTR-201ENST00000237014 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
TTR-201ENST00000237014 LRRC37AA6NMS7 1700 aa9.39□□□□□ -0.91
TTR-201ENST00000237014 COL4A5P29400 1685 aa9.39□□□□□ -0.91
TTR-201ENST00000237014 SH3TC1Q8TE82 1336 aa9.39□□□□□ -0.91
TTR-201ENST00000237014 LTBP3Q9NS15 1303 aa9.39□□□□□ -0.91
TTR-201ENST00000237014 TRIM28Q13263 835 aaKnown RBP9.39□□□□□ -0.91
TTR-201ENST00000237014 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
TTR-201ENST00000237014 RIC3Q7Z5B4 369 aa9.39□□□□□ -0.91
TTR-201ENST00000237014 MYD88Q99836 296 aa9.39□□□□□ -0.91
TTR-201ENST00000237014 TRMT112Q9UI30 125 aaKnown RBP9.39□□□□□ -0.91
TTR-201ENST00000237014 ABCC4O15439 1325 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 PI4KAP2A4QPH2 592 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 IGKV5-2P06315 115 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 LMNB1P20700 586 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 FLIIQ13045 1269 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 PI4KAP1Q8N8J0 262 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 FAM89AQ96GI7 184 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
TTR-201ENST00000237014 STK31Q9BXU1 1019 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 MAP3K2Q9Y2U5 619 aa9.38□□□□□ -0.91
TTR-201ENST00000237014 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 LTBP1Q14766 1721 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
TTR-201ENST00000237014 KSR2Q6VAB6 950 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 RPGRQ92834 1020 aaKnown RBP9.37□□□□□ -0.91
TTR-201ENST00000237014 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 CRAMP1Q96RY5 1269 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 ZBED2Q9BTP6 218 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 TAOK3Q9H2K8 898 aa9.37□□□□□ -0.91
TTR-201ENST00000237014 GPBP1L1Q9HC44 474 aaPredicted RBP9.37□□□□□ -0.91
TTR-201ENST00000237014 ZC3H4Q9UPT8 1303 aaKnown RBP9.36□□□□□ -0.91
TTR-201ENST00000237014 PPEF1O14829 653 aaPredicted RBP9.36□□□□□ -0.91
TTR-201ENST00000237014 DDX58O95786 925 aaKnown RBP9.36□□□□□ -0.91
TTR-201ENST00000237014 ALDH1B1P30837 517 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 SLFN5Q08AF3 891 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 CWF19L2Q2TBE0 894 aaKnown RBP9.36□□□□□ -0.91
TTR-201ENST00000237014 SOGA3Q5TF21 947 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
TTR-201ENST00000237014 WNT2BQ93097 391 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
TTR-201ENST00000237014 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 NMRK2Q9NPI5 230 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 MYH3P11055 1940 aa9.36□□□□□ -0.91
TTR-201ENST00000237014 NEURL1BA8MQ27 555 aa9.35□□□□□ -0.91
TTR-201ENST00000237014 E9PSI1 815 aa9.35□□□□□ -0.91
TTR-201ENST00000237014 IRS4O14654 1257 aaPredicted RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 PCCAP05165 728 aaPredicted RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 PTPREP23469 700 aa9.35□□□□□ -0.91
TTR-201ENST00000237014 FOSBP53539 338 aa9.35□□□□□ -0.91
TTR-201ENST00000237014 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
TTR-201ENST00000237014 SF3B3Q15393 1217 aaKnown RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 TRMT2AQ8IZ69 625 aaKnown RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 ZBTB38Q8NAP3 1195 aaPredicted RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 CCDC191Q8NCU4 936 aa9.35□□□□□ -0.91
TTR-201ENST00000237014 WDR90Q96KV7 1748 aa9.35□□□□□ -0.91
TTR-201ENST00000237014 ZNF277Q9NRM2 450 aaPredicted RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
TTR-201ENST00000237014 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
TTR-201ENST00000237014 F6X3S4 739 aa9.34□□□□□ -0.91
TTR-201ENST00000237014 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
TTR-201ENST00000237014 GRAPQ13588 217 aa9.34□□□□□ -0.91
TTR-201ENST00000237014 MRPL50Q8N5N7 158 aaKnown RBP9.34□□□□□ -0.91
TTR-201ENST00000237014 GRAPLQ8TC17 118 aaPredicted RBP9.34□□□□□ -0.91
TTR-201ENST00000237014 DNAAF4Q8WXU2 420 aa9.34□□□□□ -0.91
TTR-201ENST00000237014 CELF1Q92879 486 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms