RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 GEMIN8Q9NWZ8 242 aaKnown RBP9.28□□□□□ -0.92
SCG3-201ENST00000220478 TADA3O75528 432 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 GNAI2P04899 355 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 IQUBQ8NA54 791 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
SCG3-201ENST00000220478 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 VPS37CA5D8V6 355 aaPredicted RBP9.27□□□□□ -0.93
SCG3-201ENST00000220478 H3BQF6 201 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 ARHGAP29Q52LW3 1261 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 SRLQ86TD4 932 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 TMX1Q9H3N1 280 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 IL1RAPL2Q9NP60 686 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 TFIP11Q9UBB9 837 aaKnown RBP9.27□□□□□ -0.93
SCG3-201ENST00000220478 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 SPATA31D1Q6ZQQ2 1576 aa9.27□□□□□ -0.93
SCG3-201ENST00000220478 USP42Q9H9J4 1324 aaKnown RBP9.27□□□□□ -0.93
SCG3-201ENST00000220478 NEMFO60524 1076 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 KRT85P78386 507 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 STK24Q9Y6E0 443 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 SOS1Q07889 1333 aaPredicted RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 LARP1Q6PKG0 1096 aaKnown RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 PACS2Q86VP3 889 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 NME9Q86XW9 330 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 TM6SF1Q9BZW5 370 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 MIS18AQ9NYP9 233 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 STK26Q9P289 416 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 RBM47A0AV96 593 aaKnown RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 RESTQ13127 1097 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 TOB2Q14106 344 aaPredicted RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 RRS1Q15050 365 aaKnown RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 EDC4Q6P2E9 1401 aaKnown RBP9.26□□□□□ -0.93
SCG3-201ENST00000220478 FOXR1Q6PIV2 292 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 SSH3Q8TE77 659 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 HSD3B7Q9H2F3 369 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 PARP3Q9Y6F1 533 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 AGLP35573 1532 aa9.26□□□□□ -0.93
SCG3-201ENST00000220478 POLR3GO15318 223 aaPredicted RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 CCT4P50991 539 aaKnown RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 ZSCAN26Q16670 478 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 RNF20Q5VTR2 975 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 ENGASEQ8NFI3 743 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 USP44Q9H0E7 712 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 PDRG1Q9NUG6 133 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 KLHL42Q9P2K6 505 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 LRRFIP2Q9Y608 721 aaKnown RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 JCADQ9P266 1359 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 PATL2C9JE40 543 aaKnown RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 OAS2P29728 719 aaKnown RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 CC2D1AQ6P1N0 951 aaPredicted RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 SH2B1Q9NRF2 756 aaPredicted RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 NRXN3Q9Y4C0 1643 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 CASQ1P31415 396 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 SLC4A10Q6U841 1118 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 CWC27Q6UX04 472 aaKnown RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 TXLNBQ8N3L3 684 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 JAKMIP1Q96N16 626 aaKnown RBP9.25□□□□□ -0.93
SCG3-201ENST00000220478 FUT8Q9BYC5 575 aa9.25□□□□□ -0.93
SCG3-201ENST00000220478 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 DDX60Q8IY21 1712 aaKnown RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 KCNJ6P48051 423 aa9.24□□□□□ -0.93
SCG3-201ENST00000220478 SKIV2LQ15477 1246 aaKnown RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 C10orf67Q8IYJ2 551 aa9.24□□□□□ -0.93
SCG3-201ENST00000220478 FBXO18Q8NFZ0 1043 aa9.24□□□□□ -0.93
SCG3-201ENST00000220478 FTOQ9C0B1 505 aaKnown RBP eCLIP9.24□□□□□ -0.93
SCG3-201ENST00000220478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
SCG3-201ENST00000220478 FILIP1Q7Z7B0 1213 aa9.24□□□□□ -0.93
SCG3-201ENST00000220478 VTI1AQ96AJ9 217 aa9.24□□□□□ -0.93
SCG3-201ENST00000220478 TCF3P15923 654 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 RSRC2Q7L4I2 434 aaKnown RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 ERCC4Q92889 916 aaPredicted RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 PSD3Q9NYI0 1048 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 COL15A1P39059 1388 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 MAP3K5Q99683 1374 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 FOXD4Q12950 439 aaPredicted RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 CCDC191Q8NCU4 936 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 ZSCAN31Q96LW9 406 aaPredicted RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 SNRKQ9NRH2 765 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 PHLPP2Q6ZVD8 1323 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 TOPAZ1Q8N9V7 1692 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 MAP2K7O14733 419 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 EIF4A2Q14240 407 aaKnown RBP9.23□□□□□ -0.93
SCG3-201ENST00000220478 ICE2Q659A1 982 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 TMEM139Q8IV31 216 aa9.23□□□□□ -0.93
SCG3-201ENST00000220478 ATP8B1O43520 1251 aa9.22□□□□□ -0.93
SCG3-201ENST00000220478 FOXO3O43524 673 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms