RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 KAT14Q9H8E8 782 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 SYKP43405 635 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 GABPAQ06546 454 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 FYB2Q5VWT5 728 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 PPP1R21Q6ZMI0 780 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 FAM76AQ8TAV0 307 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 CLNS1AP54105 237 aaKnown RBP16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 INF2Q27J81 1249 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 HPDP32754 393 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 KRBA2Q6ZNG9 492 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 MTRF1LQ9UGC7 380 aaKnown RBP16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 SLC5A1P13866 664 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 UBE2HP62256 183 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 RNF168Q8IYW5 571 aaPredicted RBP16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 PPME1Q9Y570 386 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 ATP5DP30049 168 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 CCDC117Q8IWD4 279 aaPredicted RBP16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 KIFC2Q96AC6 838 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 RAB3IPQ96QF0 476 aaPredicted RBP16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 LIMCH1Q9UPQ0 1083 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 MCM5P33992 734 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 FAM13AO94988 1023 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 INPP1P49441 399 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 CCDC62Q6P9F0 684 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 CEP128Q6ZU80 1094 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 B4GALNT4Q76KP1 1039 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
SPTLC2-201ENST00000216484 TSPY2A6NKD2 308 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 HGSO14964 777 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 CLUL1Q15846 466 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 MX1P20591 662 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 ERMNQ8TAM6 284 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 CXorf38Q8TB03 319 aa16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 XAB2Q9HCS7 855 aaKnown RBP16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
SPTLC2-201ENST00000216484 ITIH3Q06033 890 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 IFIT5Q13325 482 aaKnown RBP16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 ANO6Q4KMQ2 910 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 KRT86O43790 486 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 PDE4BQ07343 736 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 MORC4Q8TE76 937 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 MCUR1Q96AQ8 359 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 MRRFQ96E11 262 aaKnown RBP16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 VAV2P52735 878 aa16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 ZMAT2Q96NC0 199 aaKnown RBP16.52■□□□□ 0.23
SPTLC2-201ENST00000216484 RRAGBQ5VZM2 374 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 AFAP1L2Q8N4X5 818 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 NCAPGQ9BPX3 1015 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 LCA5Q86VQ0 697 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 PHLDB2Q86SQ0 1253 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 RASSF4Q9H2L5 321 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 AFG3L2Q9Y4W6 797 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 SSFA2P28290 1259 aa16.51■□□□□ 0.23
SPTLC2-201ENST00000216484 SMIM24O75264 130 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 SKILP12757 684 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 SYT1P21579 422 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 BIRC2Q13490 618 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 GPR161Q8N6U8 529 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 CETN3O15182 167 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 PLS1Q14651 629 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 MSANTD4Q8NCY6 345 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 GUCA1BQ9UMX6 200 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 AK9Q5TCS8 1911 aa16.5■□□□□ 0.23
SPTLC2-201ENST00000216484 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 PPP2R5DQ14738 602 aa16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 HVCN1Q96D96 273 aa16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 KRT83P78385 493 aa16.49■□□□□ 0.23
SPTLC2-201ENST00000216484 PPP2R1AP30153 589 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 MIER3Q7Z3K6 550 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 CALM1P0DP23 149 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 CALM2P0DP24 149 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 CALM3P0DP25 149 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 UBXN1Q04323 297 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 HDXQ7Z353 690 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 GRM1Q13255 1194 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 CCDC122Q5T0U0 273 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 CLSTN2Q9H4D0 955 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 UTP11Q9Y3A2 253 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms