RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 NUP133Q8WUM0 1156 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 HSPA4P34932 840 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 MRPS27Q92552 414 aaKnown RBP6.6□□□□□ -1.35
CBX5-201ENST00000209875 TNPO1Q92973 898 aaKnown RBP6.6□□□□□ -1.35
CBX5-201ENST00000209875 EYA3Q99504 573 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 ZBTB40Q9NUA8 1239 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 ATRXP46100 2492 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 PDE4CQ08493 712 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 APBB1IPQ7Z5R6 666 aaPredicted RBP6.6□□□□□ -1.35
CBX5-201ENST00000209875 GNA11P29992 359 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 ARFGAP2Q8N6H7 521 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 MYD88Q99836 296 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 PLCD4Q9BRC7 762 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 C1orf115Q9H7X2 142 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 RILPL1Q5EBL4 403 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 FBXW7Q969H0 707 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 SWAP70Q9UH65 585 aa6.6□□□□□ -1.35
CBX5-201ENST00000209875 IFIT3O14879 490 aaKnown RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 IL1RAPL2Q9NP60 686 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 TOM1O60784 492 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 DKC1O60832 514 aaKnown RBP eCLIP6.59□□□□□ -1.35
CBX5-201ENST00000209875 BICDL1Q6ZP65 573 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 POLKQ9UBT6 870 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 POLR3DP05423 398 aaPredicted RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 METAP2P50579 478 aaKnown RBP eCLIP6.59□□□□□ -1.35
CBX5-201ENST00000209875 MCM10Q7L590 875 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 KAT14Q9H8E8 782 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 VAMP4O75379 141 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 UBA7P41226 1012 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 ZCRB1Q8TBF4 217 aaKnown RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 DDX54Q8TDD1 881 aaKnown RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 RPGRQ92834 1020 aaKnown RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 CCDC94Q9BW85 323 aaPredicted RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 ST5P78524 1137 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 ATP2B3Q16720 1220 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 CACNA2D4Q7Z3S7 1137 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 ATP7BP35670 1465 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 PSMA7O14818 248 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 ZNF165P49910 485 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 CRACR2BQ8N4Y2 399 aaPredicted RBP6.59□□□□□ -1.35
CBX5-201ENST00000209875 CEP112Q8N8E3 955 aa6.59□□□□□ -1.35
CBX5-201ENST00000209875 EIF4G3O43432 1585 aaKnown RBP6.59□□□□□ -1.36
CBX5-201ENST00000209875 MYL6BP14649 208 aa6.59□□□□□ -1.36
CBX5-201ENST00000209875 HMGB3O15347 200 aaKnown RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 SMAP1Q8IYB5 467 aaPredicted RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 WDR66Q8TBY9 1149 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 CLIP2Q9UDT6 1046 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 KCNA6P17658 529 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 HDAC9Q9UKV0 1011 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 ADGRL3Q9HAR2 1447 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 ERICH4A6NGS2 130 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 RNF113AO15541 343 aaKnown RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 SPC24Q8NBT2 197 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 C6orf50Q9HD87 102 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 SEPT6Q14141 434 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 VWA3BQ502W6 1294 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 GPR108Q9NPR9 543 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 MAP3K2Q9Y2U5 619 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 FAM135BQ49AJ0 1406 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 IL2RBP14784 551 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 MSANTD4Q8NCY6 345 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 NUCKS1Q9H1E3 243 aaKnown RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 ORC3Q9UBD5 711 aaPredicted RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 CHL1O00533 1208 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 ZBTB43O43298 467 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 GTF2A1P52655 376 aaPredicted RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 PIP4K2BP78356 416 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 RAB3GAP1Q15042 981 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 ZNF804AQ7Z570 1209 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 LRRC59Q96AG4 307 aaKnown RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 DHX32Q7L7V1 743 aaKnown RBP6.58□□□□□ -1.36
CBX5-201ENST00000209875 SIL1Q9H173 461 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 USP16Q9Y5T5 823 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 SCN8AQ9UQD0 1980 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 PI4KAP2A4QPH2 592 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 ANKRD62A6NC57 917 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 NLRP5P59047 1200 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 WTAPQ15007 396 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 CCDC50Q8IVM0 306 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 PI4KAP1Q8N8J0 262 aa6.58□□□□□ -1.36
CBX5-201ENST00000209875 TTC6Q86TZ1 520 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 NUTM1Q86Y26 1132 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 NLRP3Q96P20 1036 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 A0A1B0GUA9 196 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 MNAT1P51948 309 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 F13A1P00488 732 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 PLCD1P51178 756 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 CCDC77Q9BR77 488 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 DENND2AQ9ULE3 1009 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 TMEM132AQ24JP5 1023 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 TMEM67Q5HYA8 995 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 FSIP1Q8NA03 581 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 RPGRIP1Q96KN7 1286 aa6.57□□□□□ -1.36
CBX5-201ENST00000209875 HEATR1Q9H583 2144 aaKnown RBP6.57□□□□□ -1.36
CBX5-201ENST00000209875 PTPRTO14522 1441 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms