RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 EDC3Q96F86 508 aaKnown RBP23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 HAUS7Q99871 368 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 NDUFB9Q9Y6M9 179 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 ARAP2Q8WZ64 1704 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 ANO2Q9NQ90 1003 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 DIAPH3Q9NSV4 1193 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 A0A1B0GUL6 1792 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 BECN1Q14457 450 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 SF3B3Q15393 1217 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 XAGE2Q96GT9 111 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 RGPD3A6NKT7 1758 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 RGPD4Q7Z3J3 1758 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 PDE8BO95263 885 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 ADORA1P30542 326 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 TPTE2Q6XPS3 522 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 MPHOSPH8Q99549 860 aa23.86■■□□□ 1.41
TNFRSF1A-201ENST00000162749 AKAP11Q9UKA4 1901 aa23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 ATP2B3Q16720 1220 aa23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 DNAJC2Q99543 621 aaKnown RBP23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 FSD1Q9BTV5 496 aa23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 TBC1D2Q9BYX2 928 aa23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 MROH5Q6ZUA9 1318 aa23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 CARMIL3Q8ND23 1372 aa23.85■■□□□ 1.41
TNFRSF1A-201ENST00000162749 NFIXQ14938 502 aa23.84■■□□□ 1.41
TNFRSF1A-201ENST00000162749 TNRC6CQ9HCJ0 1690 aaKnown RBP23.84■■□□□ 1.41
TNFRSF1A-201ENST00000162749 GYS1P13807 737 aa23.83■■□□□ 1.41
TNFRSF1A-201ENST00000162749 HMGB2P26583 209 aaKnown RBP23.83■■□□□ 1.41
TNFRSF1A-201ENST00000162749 HIP1O00291 1037 aa23.83■■□□□ 1.4
TNFRSF1A-201ENST00000162749 IGHMBP2P38935 993 aaKnown RBP23.83■■□□□ 1.4
TNFRSF1A-201ENST00000162749 CCDC158Q5M9N0 1113 aa23.82■■□□□ 1.4
TNFRSF1A-201ENST00000162749 RUFY2Q8WXA3 655 aa23.82■■□□□ 1.4
TNFRSF1A-201ENST00000162749 EPB41L2O43491 1005 aaKnown RBP23.82■■□□□ 1.4
TNFRSF1A-201ENST00000162749 CDC5LQ99459 802 aaKnown RBP23.82■■□□□ 1.4
TNFRSF1A-201ENST00000162749 IFIT1P09914 478 aaKnown RBP23.81■■□□□ 1.4
TNFRSF1A-201ENST00000162749 GORABQ5T7V8 394 aa23.81■■□□□ 1.4
TNFRSF1A-201ENST00000162749 DDX46Q7L014 1031 aaKnown RBP23.81■■□□□ 1.4
TNFRSF1A-201ENST00000162749 CCDC24Q8N4L8 307 aa23.81■■□□□ 1.4
TNFRSF1A-201ENST00000162749 HELBQ8NG08 1087 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF1A-201ENST00000162749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.81■■□□□ 1.4
TNFRSF1A-201ENST00000162749 MYH7P12883 1935 aa23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 FAM227BQ96M60 508 aa23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 NLRP3Q96P20 1036 aa23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 RFX7Q2KHR2 1363 aa23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 NMIQ13287 307 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 PUM3Q15397 648 aaKnown RBP23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 ZNF827Q17R98 1081 aa23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 PAG1Q9NWQ8 432 aa23.8■■□□□ 1.4
TNFRSF1A-201ENST00000162749 RAD50Q92878 1312 aa23.79■■□□□ 1.4
TNFRSF1A-201ENST00000162749 FGFR2P21802 821 aa23.79■■□□□ 1.4
TNFRSF1A-201ENST00000162749 TTC39AQ5SRH9 613 aa23.79■■□□□ 1.4
TNFRSF1A-201ENST00000162749 LSG1Q9H089 658 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1A-201ENST00000162749 GOLIM4O00461 696 aa23.79■■□□□ 1.4
TNFRSF1A-201ENST00000162749 KBTBD3Q8NAB2 608 aa23.79■■□□□ 1.4
TNFRSF1A-201ENST00000162749 MYO5AQ9Y4I1 1855 aaKnown RBP23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 A0A0D9SFI3 127 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 LPIN2Q92539 896 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 AKT1S1Q96B36 256 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 NPHP1O15259 732 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 TAF5LO75529 589 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 SNX21Q969T3 373 aa23.78■■□□□ 1.4
TNFRSF1A-201ENST00000162749 RABEP1Q15276 862 aa23.77■■□□□ 1.4
TNFRSF1A-201ENST00000162749 CNBD1Q8NA66 436 aa23.77■■□□□ 1.4
TNFRSF1A-201ENST00000162749 SNRKQ9NRH2 765 aa23.77■■□□□ 1.4
TNFRSF1A-201ENST00000162749 TFCP2L1Q9NZI6 479 aa23.77■■□□□ 1.4
TNFRSF1A-201ENST00000162749 SCARF1Q14162 830 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 KIAA1211Q6ZU35 1233 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 CELF1Q92879 486 aaKnown RBP23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 ANTXR1Q9H6X2 564 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 PALD1Q9ULE6 856 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 SNAP23O00161 211 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 MCCP23508 829 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 CHRNDQ07001 517 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 BSDC1Q9NW68 430 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 MED23Q9ULK4 1368 aa23.76■■□□□ 1.39
TNFRSF1A-201ENST00000162749 CD2BP2O95400 341 aaKnown RBP23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 TM4SF1P30408 202 aa23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 FRAT2O75474 233 aaPredicted RBP23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 CHGBP05060 677 aa23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 HSPA4P34932 840 aa23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 PRR5LQ6MZQ0 368 aa23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 HSCBQ8IWL3 235 aa23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 ZNF512BQ96KM6 892 aaPredicted RBP23.75■■□□□ 1.39
TNFRSF1A-201ENST00000162749 FKBP4Q02790 459 aaKnown RBP eCLIP23.74■■□□□ 1.39
TNFRSF1A-201ENST00000162749 SLKQ9H2G2 1235 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF1A-201ENST00000162749 MCAMP43121 646 aa23.74■■□□□ 1.39
TNFRSF1A-201ENST00000162749 ANAPC15P60006 121 aa23.74■■□□□ 1.39
TNFRSF1A-201ENST00000162749 CCDC102BQ68D86 513 aa23.74■■□□□ 1.39
TNFRSF1A-201ENST00000162749 SLC5A1P13866 664 aa23.73■■□□□ 1.39
TNFRSF1A-201ENST00000162749 PTH1RQ03431 593 aa23.73■■□□□ 1.39
TNFRSF1A-201ENST00000162749 PI16Q6UXB8 463 aa23.73■■□□□ 1.39
TNFRSF1A-201ENST00000162749 CCDC171Q6TFL3 1326 aa23.73■■□□□ 1.39
TNFRSF1A-201ENST00000162749 PHKA1P46020 1223 aa23.72■■□□□ 1.39
TNFRSF1A-201ENST00000162749 ZNF589Q86UQ0 364 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF1A-201ENST00000162749 TICAM2Q86XR7 235 aa23.72■■□□□ 1.39
TNFRSF1A-201ENST00000162749 IL17RAQ96F46 866 aa23.72■■□□□ 1.39
TNFRSF1A-201ENST00000162749 SERPINB2P05120 415 aa23.72■■□□□ 1.39
TNFRSF1A-201ENST00000162749 ARID4AP29374 1257 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF1A-201ENST00000162749 ZAP70P43403 619 aa23.71■■□□□ 1.39
TNFRSF1A-201ENST00000162749 RPS8P62241 208 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms