RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PDILTQ8N807 584 aa19.6■□□□□ 0.73
CTDP1-201ENST00000075430 CTIFO43310 598 aaKnown RBP19.6■□□□□ 0.73
CTDP1-201ENST00000075430 SNW1Q13573 536 aaKnown RBP19.6■□□□□ 0.73
CTDP1-201ENST00000075430 ANKRD24Q8TF21 1146 aa19.6■□□□□ 0.73
CTDP1-201ENST00000075430 PAXBP1Q9Y5B6 917 aa19.6■□□□□ 0.73
CTDP1-201ENST00000075430 OVOS2A0A0J9YW53 1432 aa19.6■□□□□ 0.73
CTDP1-201ENST00000075430 OVOS2Q6IE36 1432 aa19.6■□□□□ 0.73
CTDP1-201ENST00000075430 RIMS1Q86UR5 1692 aaKnown RBP19.59■□□□□ 0.73
CTDP1-201ENST00000075430 HTATSF1O43719 755 aaKnown RBP19.59■□□□□ 0.73
CTDP1-201ENST00000075430 STK38Q15208 465 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 PLA2G4DQ86XP0 818 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 GOLIM4O00461 696 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 ATP2B1P20020 1258 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 SCRN1Q12765 414 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 CREBRFQ8IUR6 639 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 FEZ1Q99689 392 aa19.59■□□□□ 0.73
CTDP1-201ENST00000075430 SPATA31D1Q6ZQQ2 1576 aa19.58■□□□□ 0.73
CTDP1-201ENST00000075430 GCP02774 474 aa19.58■□□□□ 0.73
CTDP1-201ENST00000075430 CHMP4AQ9BY43 222 aa19.58■□□□□ 0.73
CTDP1-201ENST00000075430 CFAP45Q9UL16 551 aa19.58■□□□□ 0.73
CTDP1-201ENST00000075430 TTC41PQ6P2S7 1318 aa19.58■□□□□ 0.73
CTDP1-201ENST00000075430 RXRAP19793 462 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 ANKRD1Q15327 319 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 ARHGAP29Q52LW3 1261 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 CEP57L1Q8IYX8 460 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 DBNDD2Q9BQY9 259 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 PTPDC1A2A3K4 754 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 TFCP2Q12800 502 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 UBE3BQ7Z3V4 1068 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 TDRD7Q8NHU6 1098 aaKnown RBP19.58■□□□□ 0.72
CTDP1-201ENST00000075430 IP6K1Q92551 441 aa19.58■□□□□ 0.72
CTDP1-201ENST00000075430 DDX41Q9UJV9 622 aaKnown RBP19.58■□□□□ 0.72
CTDP1-201ENST00000075430 GRM8O00222 908 aa19.57■□□□□ 0.72
CTDP1-201ENST00000075430 STX1AQ16623 288 aa19.57■□□□□ 0.72
CTDP1-201ENST00000075430 CCDC34Q96HJ3 373 aa19.57■□□□□ 0.72
CTDP1-201ENST00000075430 SEC31AO94979 1220 aaKnown RBP19.57■□□□□ 0.72
CTDP1-201ENST00000075430 EPHA10Q5JZY3 1008 aa19.57■□□□□ 0.72
CTDP1-201ENST00000075430 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
CTDP1-201ENST00000075430 CYP21A2P08686 494 aa19.56■□□□□ 0.72
CTDP1-201ENST00000075430 MNS1Q8NEH6 495 aa19.56■□□□□ 0.72
CTDP1-201ENST00000075430 XPO4Q9C0E2 1151 aaKnown RBP19.56■□□□□ 0.72
CTDP1-201ENST00000075430 ZCCHC17Q9NP64 241 aaKnown RBP19.56■□□□□ 0.72
CTDP1-201ENST00000075430 TIMM10P62072 90 aa19.56■□□□□ 0.72
CTDP1-201ENST00000075430 DPCR1Q3MIW9 517 aa19.56■□□□□ 0.72
CTDP1-201ENST00000075430 AOX1Q06278 1338 aa19.56■□□□□ 0.72
CTDP1-201ENST00000075430 ZNF397Q8NF99 534 aaPredicted RBP19.56■□□□□ 0.72
CTDP1-201ENST00000075430 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
CTDP1-201ENST00000075430 SLU7O95391 586 aaKnown RBP19.55■□□□□ 0.72
CTDP1-201ENST00000075430 SFPQP23246 707 aaKnown RBP eCLIP19.55■□□□□ 0.72
CTDP1-201ENST00000075430 GYS2P54840 703 aa19.55■□□□□ 0.72
CTDP1-201ENST00000075430 FKBP4Q02790 459 aaKnown RBP eCLIP19.55■□□□□ 0.72
CTDP1-201ENST00000075430 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
CTDP1-201ENST00000075430 TAF5LO75529 589 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 SLFN14P0C7P3 912 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 ERC1Q8IUD2 1116 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 NEK11Q8NG66 645 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 SERPINC1P01008 464 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 WASHC4Q2M389 1173 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 ANO10Q9NW15 660 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 NEXNQ0ZGT2 675 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 RESTQ13127 1097 aa19.54■□□□□ 0.72
CTDP1-201ENST00000075430 AGLP35573 1532 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 ATP1A3P13637 1013 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 IQCB1Q15051 598 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 TERF2Q15554 542 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 COPS6Q7L5N1 327 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 CFAP100Q494V2 611 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 SPECC1Q5M775 1068 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 CCDC82Q8N4S0 544 aa19.53■□□□□ 0.72
CTDP1-201ENST00000075430 NOL10Q9BSC4 688 aaKnown RBP19.53■□□□□ 0.72
CTDP1-201ENST00000075430 KSR2Q6VAB6 950 aa19.52■□□□□ 0.72
CTDP1-201ENST00000075430 UBXN4Q92575 508 aa19.52■□□□□ 0.72
CTDP1-201ENST00000075430 USP31Q70CQ4 1352 aa19.52■□□□□ 0.72
CTDP1-201ENST00000075430 TEX35Q5T0J7 233 aa19.52■□□□□ 0.72
CTDP1-201ENST00000075430 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
CTDP1-201ENST00000075430 NDUFA8P51970 172 aa19.52■□□□□ 0.71
CTDP1-201ENST00000075430 RBM6P78332 1123 aaKnown RBP19.52■□□□□ 0.71
CTDP1-201ENST00000075430 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.71
CTDP1-201ENST00000075430 UTP14AQ9BVJ6 771 aaKnown RBP19.52■□□□□ 0.71
CTDP1-201ENST00000075430 DBNLQ9UJU6 430 aaKnown RBP19.52■□□□□ 0.71
CTDP1-201ENST00000075430 CPLX1O14810 134 aa19.51■□□□□ 0.71
CTDP1-201ENST00000075430 TTC5Q8N0Z6 440 aa19.51■□□□□ 0.71
CTDP1-201ENST00000075430 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
CTDP1-201ENST00000075430 RNMTO43148 476 aaKnown RBP19.51■□□□□ 0.71
CTDP1-201ENST00000075430 ADCY9O60503 1353 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 DDX58O95786 925 aaKnown RBP19.5■□□□□ 0.71
CTDP1-201ENST00000075430 STOX1Q6ZVD7 989 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 CARD6Q9BX69 1037 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 CLIC4Q9Y696 253 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 ANKRD26Q9UPS8 1709 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 HIP1O00291 1037 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 NRDCO43847 1150 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 PCDHA7Q9UN72 937 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 AXIN2Q9Y2T1 843 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 CCZ1BP86790 482 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms