RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Cyb5rlB1AS42 316 aa19.72■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Ccdc42Q5SV66 316 aa19.72■□□□□ 0.75
Ebf3-204ENSMUST00000169486 BrapQ99MP8 591 aa19.72■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Znf568E9PYI1 671 aa19.72■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Lmod1Q8BVA4 595 aa19.72■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Jmjd4Q8BFT6 427 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Acnat2Q8BGG9 420 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 2310002L09RikQ9D7L5 217 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Lekr1B2RVN1 116 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Zscan25B2RX31 543 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Fam186bD3Z420 943 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Bach1P97302 739 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Atp2b3Q0VF55 1220 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Plekho1Q9JIY0 408 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Terf2ipQ91VL8 393 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Elf2Q9JHC9 593 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Myo1bP46735 1107 aa19.71■□□□□ 0.75
Ebf3-204ENSMUST00000169486 Gm28919A0A087WP35 240 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Speer4aF8VPX6 267 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Acbd3Q8BMP6 525 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 ParvgQ9ERD8 331 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Clec11aO88200 328 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Tbc1d5Q80XQ2 815 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Acsbg1Q99PU5 721 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Nap1l2P51860 460 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Naa30Q8CES0 364 aa19.7■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Zfp42P22227 288 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Rassf4Q8CB96 322 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Izumo3A6PWV3 263 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Mtx1P47802 317 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Trak2Q6P9N8 913 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Lztfl1Q9JHQ5 299 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Taf7Q9R1C0 341 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Zkscan5Q9Z1D8 819 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Abcc1O35379 1528 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Kdm3aQ6PCM1 1323 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Tpx2A2APB8 745 aaKnown RBP19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ube3aO08759 870 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Atp1a2Q6PIE5 1020 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Plcd1Q8R3B1 756 aa19.69■□□□□ 0.74
Ebf3-204ENSMUST00000169486 E9QMW4 1145 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Nup160Q9Z0W3 1402 aaKnown RBP19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Gm28510A0A087WP28 240 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Nf2P46662 596 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Asic1Q6NXK8 526 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Arhgef18Q6P9R4 1021 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Rdm1Q9CQK3 281 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Atg4a-psA0A0G2JFS9 396 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Slc4a4O88343 1079 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Znf526Q8BI66 675 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Atg4aQ8C9S8 396 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Frat2Q8K025 231 aa19.68■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Bach2P97303 839 aa19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Hsf2bpQ9D4G2 338 aa19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Uso1Q9Z1Z0 959 aaKnown RBP19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ttc12Q8BW49 704 aa19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Cnnm2Q3TWN3 875 aa19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Lmbrd2Q8C561 694 aa19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Rps6kb1Q8BSK8 525 aa19.67■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Slc1a4O35874 532 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ppp4r3aQ6P2K6 820 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Gramd4Q8CB44 633 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Hs2st1Q8R3H7 356 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Olr1Q9EQ09 363 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ifit1bl2Q3U687 466 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Gm7347D3YYI9 267 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Tubb4bP68372 445 aaKnown RBP19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Vps54Q5SPW0 977 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Gas8Q60779 478 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Igbp1Q61249 340 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Krt79Q8VED5 531 aa19.66■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Pex1Q5BL07 1284 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Dph6Q9CQ28 267 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Sept14Q9DA97 430 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 TrdnE9Q9K5 693 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Gm10378F6XQQ1 160 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Akr1c19G3X9Y6 323 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Specc1Q5SXY1 1067 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ctnna2Q61301 953 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 RarsQ9D0I9 660 aaKnown RBP19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Lonp2Q9DBN5 852 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ripk4Q9ERK0 786 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Dennd3A2RT67 1274 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Ccdc57Q6PHN1 1016 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Pde4dQ01063 747 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Sdad1Q80UZ2 687 aaKnown RBP19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Rtn1Q8K0T0 780 aa19.65■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Tubb5P99024 444 aaKnown RBP19.64■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Krt15Q61414 452 aa19.64■□□□□ 0.74
Ebf3-204ENSMUST00000169486 DlatQ8BMF4 642 aa19.64■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Lrrc2Q8VDB8 371 aa19.64■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Nip7Q9CXK8 180 aaKnown RBP19.64■□□□□ 0.74
Ebf3-204ENSMUST00000169486 Myl3P09542 204 aa19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 Shtn1Q8K2Q9 631 aa19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 Ssh2Q5SW75 1423 aa19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 Usp5P56399 858 aaKnown RBP19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 SfpqQ8VIJ6 699 aaKnown RBP19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 Ubxn1Q922Y1 297 aa19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 Dmrtc1Q9D9R7 182 aa19.64■□□□□ 0.73
Ebf3-204ENSMUST00000169486 Ppfibp2O35711 882 aa19.64■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms