RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 GmnnO88513 206 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Nek9Q8K1R7 984 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Synpo2Q91YE8 1087 aaKnown RBP8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Tubb4aQ9D6F9 444 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Uhrf1bp1lA2RSJ4 1457 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 MaddQ80U28 1577 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Cdc42bpgQ80UW5 1551 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Mcm5P49718 733 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Jakmip3Q5DTN8 844 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ppp2r2cQ8BG02 447 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ak2Q9WTP6 239 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Knl1Q66JQ7 1612 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 C2cd2E9Q3C1 696 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ppp1r15aP17564 657 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Cct5P80316 541 aaKnown RBP8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Gabpb2P81069 414 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Smarcc1P97496 1104 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ppp1r7Q3UM45 361 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 HrQ61645 1182 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Map3k11Q80XI6 850 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Eif3cQ8R1B4 911 aaKnown RBP8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccdc12Q8R344 166 aaKnown RBP8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccer1Q9CQL2 403 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccdc112A0AUP1 442 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Cep63Q3UPP8 700 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Znf697Q569E7 569 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Desi2Q9D291 194 aa8.8□□□□□ -1
Bdnf-209ENSMUST00000111050 Nup160Q9Z0W3 1402 aaKnown RBP8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 A0A0U1RNP2 1173 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Dhx8A2A4P0 1244 aaKnown RBP8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Slc1a4O35874 532 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Tmem109Q3UBX0 243 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Ehd4Q9EQP2 541 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 4930407I10RikD3Z5T8 1512 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Neurl4Q5NCX5 1563 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Kcnb2A6H8H5 907 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Ugt1a5B2RT14 529 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Gsto1O09131 240 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 PsapQ61207 557 aaKnown RBP8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Erlin2Q8BFZ9 340 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Q8C1R3 189 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Mtmr3Q8K296 1196 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Mtmr6Q8VE11 617 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Stk31Q99MW1 1018 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Ankrd35E9Q9D8 996 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Hnrnph1O35737 449 aaKnown RBP8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Psme1P97371 249 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Hpcal4Q8BGZ1 191 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccdc73Q8CDM4 1066 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 PpanQ91YU8 470 aaKnown RBP8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Slc5a4aQ9ET37 656 aa8.79□□□□□ -1
Bdnf-209ENSMUST00000111050 Ppfia4B8QI36 1187 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Hnrnph2P70333 449 aaKnown RBP8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccdc40Q8BI79 1192 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 KynuQ9CXF0 464 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Mybbp1aQ7TPV4 1344 aaKnown RBP8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Neo1P97798 1493 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Msh6P54276 1358 aaKnown RBP8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccdc33Q3ULW6 985 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Itga6Q61739 1091 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Ehd2Q8BH64 543 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 LtkP08923 888 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Kifap3P70188 793 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Specc1lQ2KN98 1118 aaKnown RBP8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Abcf1Q6P542 837 aaKnown RBP8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Sp8Q8BMJ8 486 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Iqcb1Q8BP00 598 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Ccdc186Q8C9S4 917 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Rsph6aQ8CDR2 708 aa8.78□□□□□ -1
Bdnf-209ENSMUST00000111050 Aox2Q5SGK3 1345 aa8.77□□□□□ -1
Bdnf-209ENSMUST00000111050 Rnf17Q99MV7 1640 aa8.77□□□□□ -1
Bdnf-209ENSMUST00000111050 Ap1g2O88512 791 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 CalrP14211 416 aaKnown RBP8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Ric8aQ3TIR3 530 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 CtcfQ61164 736 aaKnown RBP8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Foxd1Q61345 456 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 MmeQ61391 750 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Ddx11Q6AXC6 880 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Cd209bQ8CJ91 325 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Dydc1Q9D9T0 175 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Cdk12Q14AX6 1484 aaKnown RBP8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Usp32F8VPZ3 1604 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Exoc5Q3TPX4 708 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Baiap3Q80TT2 1134 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Lrrc1Q80VQ1 524 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Cdca8Q8BHX3 289 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Trerf1Q8BXJ2 1205 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Anapc4Q91W96 807 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Psma5Q9Z2U1 241 aaKnown RBP8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Sipa1l1Q8C0T5 1782 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Stat1P42225 749 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Chpf2Q3UU43 768 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Cdk19Q8BWD8 501 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Hps3Q91VB4 1002 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Irx6Q9ER75 438 aa8.77□□□□□ -1.01
Bdnf-209ENSMUST00000111050 NpatQ8BMA5 1420 aa8.76□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Trim30cD3YVI9 513 aa8.76□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Vsnl1P62761 191 aa8.76□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Psmb7P70195 277 aa8.76□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Kcna4Q61423 654 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms