RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Erc1Q99MI1 1120 aa13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Isca1Q9D924 129 aa13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Tnrc6cQ3UHC0 1690 aaKnown RBP13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ccdc158Q8CDI6 1109 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Flad1Q8R123 492 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Tbc1d8Q9Z1A9 1134 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ubn2Q80WC1 1314 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Trim59Q922Y2 403 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm45140A0A0N4SUM8 220 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Limch1Q3UH68 1057 aa13.68□□□□□ -0.22
Trim11-202ENSMUST00000108809 Mctp1E9PV86 951 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ythdc1E9Q5K9 736 aaKnown RBP13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 AppP12023 770 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Rgs9O54828 675 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ehd4Q9EQP2 541 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Pde3aQ9Z0X4 1141 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Npc1l1Q6T3U4 1333 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Tsen34Q8BMZ5 316 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 R3hcc1Q8BSI6 488 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Golim4Q8BXA1 655 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ints5Q8CHT3 1018 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Nop14Q8R3N1 860 aaKnown RBP13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ltb4r2Q9JJL9 360 aa13.67□□□□□ -0.22
Trim11-202ENSMUST00000108809 Slc5a1Q8C3K6 665 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Rbm42Q91V81 474 aaKnown RBP13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Osbpl5Q9ER64 874 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Prl3d2F6R3P9 224 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Cyp2d34L7N463 504 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Cdk4P30285 303 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm21985Q6P6P5 1106 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Mtmr3Q8K296 1196 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Iffo2Q8R2V2 512 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 BrapQ99MP8 591 aa13.66□□□□□ -0.22
Trim11-202ENSMUST00000108809 Cfap58B2RW38 873 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Timm10P62073 90 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Mrpl44Q9CY73 333 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Rrs1Q9CYH6 365 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Hmgn5Q9JL35 406 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 CebpzP53569 1052 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Hspd1P63038 573 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ifit1Q64282 463 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Atad2Q8CDM1 1040 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 PappaQ8R4K8 1624 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Dhx30Q99PU8 1217 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Arap2Q8BZ05 1703 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Usp42B2RQC2 1324 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm21663A0A0G2JE01 267 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm7361D3Z6R1 267 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 5031410I06RikE9Q4E0 267 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm1979E9QAN3 267 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm5862K7N5V5 267 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Gm10220K7N660 267 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Polr3gQ6NXY9 223 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Nxf7Q80SZ6 620 aaKnown RBP13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Shisa4Q8CA71 197 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Bicd2Q921C5 820 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Cwc25Q9DBF7 416 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Irx4Q9QY61 515 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Zeb2Q9R0G7 1215 aa13.65□□□□□ -0.22
Trim11-202ENSMUST00000108809 Slc4a1P04919 929 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Asap2Q7SIG6 958 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Lmbrd2Q8C561 694 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Gys2Q8VCB3 704 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 AbraQ8BUZ1 375 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Ciao1Q99KN2 339 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Snw1Q9CSN1 536 aaKnown RBP13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Eya2O08575 532 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Nrbp1Q99J45 535 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Tlcd1Q99JT6 247 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Rdm1Q9CQK3 281 aa13.64□□□□□ -0.23
Trim11-202ENSMUST00000108809 Krt25Q8VCW2 446 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Ppil4Q9CXG3 492 aaKnown RBP13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Speer4bQ9D9F7 267 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Myh7Q91Z83 1935 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Clec11aO88200 328 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Sh3bgrQ9WUZ7 214 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Lekr1B2RVN1 116 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 TrhQ62361 256 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Ncaph2Q8BSP2 607 aa13.63□□□□□ -0.23
Trim11-202ENSMUST00000108809 Casz1Q9CWL2 1761 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Ccdc112A0AUP1 442 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Atf3Q60765 181 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Tmem266Q8BZB3 538 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Stard3nlQ9DCI3 235 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Sall1Q9ER74 1322 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Rrp1P56183 494 aaKnown RBP13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Rbm17Q8JZX4 405 aaKnown RBP13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Pcdhb15Q91Y04 786 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Fam84aQ9D650 292 aa13.62□□□□□ -0.23
Trim11-202ENSMUST00000108809 Plekhd1B2RPU2 505 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Oas2E9Q9A9 742 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Trim56Q80VI1 734 aaKnown RBP13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Cdca8Q8BHX3 289 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Rassf8Q8CJ96 419 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Ifi35Q9D8C4 286 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Col3a1P08121 1464 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Wdr19Q3UGF1 1341 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Myd88P22366 296 aa13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Cct2P80314 535 aaKnown RBP13.61□□□□□ -0.23
Trim11-202ENSMUST00000108809 Serpina10Q8R121 448 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms