RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Sh3bgrQ9WUZ7 214 aa25.51■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Arglu1Q3UL36 271 aaKnown RBP25.5■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Mkrn3Q60764 544 aa25.5■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Ppp6r1Q7TSI3 856 aa25.5■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Kcnh4A2A5F7 1018 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Pdia6Q922R8 440 aaKnown RBP25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Krt85Q9Z2T6 507 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Gm11983V9GXS8 105 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Cct4P80315 539 aaKnown RBP25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Ifit2Q64112 472 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Sgsm2Q80U12 1005 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 SnrkQ8VDU5 748 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Cdca7lQ922M5 438 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Mst1rQ62190 1378 aa25.49■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Ppfia1B2RXQ2 1266 aa25.48■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Kcnd1Q03719 651 aa25.48■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Bloc1s2Q9CWG9 143 aa25.48■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Adcy9P51830 1353 aa25.48■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Shank3Q4ACU6 1730 aa25.48■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Ica1lQ3TY65 431 aa25.48■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Pkp1P97350 728 aaKnown RBP25.47■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 H2afxP27661 143 aaKnown RBP25.46■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Ints4Q8CIM8 964 aa25.46■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Lrp6O88572 1613 aa25.46■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Mrpl50Q8VDT9 159 aaKnown RBP25.46■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 AceP09470 1312 aa25.45■■□□□ 1.67
Ccdc9-201ENSMUST00000041010 Cfap58B2RW38 873 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 1700113H08RikE9Q9Q5 327 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Tsr2Q8C8T8 191 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Brf1Q8CFK2 676 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Efcab2Q9CQ46 164 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Bend3Q6PAL0 825 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Spag5Q7TME2 1165 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Slu7Q8BHJ9 585 aa25.45■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ier5O89113 308 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ccdc34Q3UI66 367 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Zkscan4Q5SZT6 480 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Irf9Q61179 399 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ano10Q8BH79 659 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Bicd2Q921C5 820 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Fer1l6E0CZ42 1862 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Anks1aP59672 1150 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Cep57l1Q8VDS7 400 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ginm1Q91WR6 327 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Elf2Q9JHC9 593 aa25.44■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Arhgap4B1AUY3 965 aa25.43■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Cnnm1Q0GA42 951 aa25.43■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Srgap1Q91Z69 1062 aa25.43■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Crb1Q8VHS2 1405 aa25.43■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Hspa1lP16627 641 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 FanccP50652 591 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Bcl2l13P59017 434 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 HellsQ60848 821 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ints5Q8CHT3 1018 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Lcmt1A0A0U1RNF2 332 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Samd1D3YXK1 519 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Flad1Q8R123 492 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Kcnk13Q8R1P5 405 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ddx60E9PZQ1 1711 aa25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Eif3aP23116 1344 aaKnown RBP25.42■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Clec11aO88200 328 aa25.41■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Dmrt2Q8BG36 561 aa25.41■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Tomm22Q9CPQ3 142 aa25.41■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Anp32eP97822 260 aaKnown RBP25.41■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Shank2Q80Z38 1476 aa25.41■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ubxn4Q8VCH8 506 aa25.4■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Lrriq3Q14DL3 633 aa25.4■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Lnx1O70263 728 aa25.39■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Ccdc96Q9CR92 584 aa25.39■■□□□ 1.66
Ccdc9-201ENSMUST00000041010 Stx1aO35526 288 aa25.39■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 EspnlQ3UYR4 1005 aa25.39■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Map3k2Q61083 619 aa25.39■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Cnpy2Q9QXT0 182 aa25.39■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Csrnp1P59054 583 aa25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Rtel1Q0VGM9 1203 aa25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Panx2Q6IMP4 677 aa25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Me3Q8BMF3 604 aa25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Rbm33Q9CXK9 1231 aaKnown RBP25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Tceal9Q9DD24 104 aa25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 PigbQ9JJQ0 542 aa25.38■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Rbm8a2A0A0N4SUH6 174 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Exoc6bA6H5Z3 810 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Mast2Q60592 1734 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Slc20a2Q80UP8 656 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 R3hcc1Q8BSI6 488 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Snw1Q9CSN1 536 aaKnown RBP25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Rbm8aQ9CWZ3 174 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Cacna1sQ02789 1880 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Sik1Q60670 779 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Prkab2Q6PAM0 271 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Slc5a4bQ91ZP4 660 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Ak2Q9WTP6 239 aa25.37■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Ddx11Q6AXC6 880 aa25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Pm20d1Q8C165 503 aa25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Psma5Q9Z2U1 241 aaKnown RBP25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Nwd2Q6P5U7 1742 aa25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Znf568E9PYI1 671 aa25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Zap70P43404 618 aa25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Tmem109Q3UBX0 243 aa25.36■■□□□ 1.65
Ccdc9-201ENSMUST00000041010 Pde3bQ61409 1100 aa25.36■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 124 ms