RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Tbc1d30Q69ZT9 766 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Kank4Q6P9J5 1016 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Mb21d2Q8C525 428 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ccdc178Q8CDV0 866 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Erc1Q99MI1 1120 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Timm10P62073 90 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ncbp1Q3UYV9 790 aaKnown RBP12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Usp44Q8C2S0 711 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Zfp113Q8C689 439 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Cbx1P83917 185 aaKnown RBP12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Gsdma2Q32M21 443 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ccnl1Q52KE7 532 aaKnown RBP12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Mctp2Q5RJH2 878 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ankib1Q6ZPS6 1085 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Tmem266Q8BZB3 538 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Lrrfip2Q91WK0 415 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Med4Q9CQA5 270 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Bloc1s2Q9CWG9 143 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Cap2Q9CYT6 476 aa12.99□□□□□ -0.33
Ldb3-202ENSMUST00000022328 NpeppsQ11011 920 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Smg7Q5RJH6 1138 aaKnown RBP12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Chmp3Q9CQ10 224 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Rdm1Q9CQK3 281 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Leo1Q5XJE5 667 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Asap2Q7SIG6 958 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Golim4Q8BXA1 655 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Tsr2Q8C8T8 191 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Krt25Q8VCW2 446 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Cep57l1Q8VDS7 400 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Igbp1bQ9QZ29 343 aa12.98□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Npc1l1Q6T3U4 1333 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ccdc173A0JLY1 547 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Kcnh4A2A5F7 1018 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Bach2P97303 839 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ccdc129Q14B48 1034 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Zfp251Q6PCX8 632 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Gnl3lQ6PGG6 577 aaKnown RBP12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Sipa1l3G3X9J0 1776 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Irgm2A0A140LIF8 407 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ptgs1P22437 602 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Cyp2d10P24456 504 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Atp2b3Q0VF55 1220 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 EappQ5BU09 281 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ppp1r10Q80W00 888 aaKnown RBP12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Zscan22Q8BGS5 496 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Gigyf1Q99MR1 1044 aaKnown RBP12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 SrrtQ99MR6 875 aaKnown RBP12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Chd1lQ9CXF7 900 aa12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ppil4Q9CXG3 492 aaKnown RBP12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Mad1l1Q9WTX8 717 aaKnown RBP12.97□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Rgl2Q61193 778 aa12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ccdc66Q6NS45 935 aa12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Casc1Q6TDU8 730 aa12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Smim5Q8BT42 78 aa12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ptcd1Q8C2E4 695 aaKnown RBP12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ttc19Q8CC21 365 aa12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 ApobrQ8VBT6 942 aa12.96□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Atp8b3Q6UQ17 1335 aa12.96□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Cd22P35329 862 aa12.96□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Stat1P42225 749 aa12.96□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Naa30Q8CES0 364 aa12.96□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Pus3Q9JI38 481 aa12.96□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Slc4a1P04919 929 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Pde4dQ01063 747 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Ctdnep1Q3TP92 244 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Clca2Q8BG22 942 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Nav1Q8CH77 1875 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Tnrc6cQ3UHC0 1690 aaKnown RBP12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Fam184aE9PW83 1143 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Ythdc1E9Q5K9 736 aaKnown RBP12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Prl7a2O54831 253 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Samm50Q8BGH2 469 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Me3Q8BMF3 604 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Nup88Q8CEC0 753 aaKnown RBP12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Wdr24Q8CFJ9 790 aa12.95□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Plcb3P51432 1234 aaKnown RBP12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Nap1l3Q794H2 544 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Olfml1Q8BSH2 233 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Zeb2Q9R0G7 1215 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Kdm3aQ6PCM1 1323 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Cavin1O54724 392 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Cyp19a1P28649 503 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Hvcn1Q3U2S8 269 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Esyt1Q3U7R1 1092 aaKnown RBP12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Babam1Q3UI43 333 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Stac3Q8BZ71 360 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Ccdc158Q8CDI6 1109 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Rbm42Q91V81 474 aaKnown RBP12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Ncoa5Q91W39 579 aaKnown RBP12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Irx4Q9QY61 515 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Hdac6Q9Z2V5 1149 aa12.94□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Zfp51Q3U4L8 781 aa12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Nol10Q5RJG1 687 aaKnown RBP12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 ZwintQ9CQU5 252 aa12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Arap2Q8BZ05 1703 aa12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Hspd1P63038 573 aaKnown RBP12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Ppp4r3bQ922R5 820 aa12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Sytl4Q9R0Q1 673 aa12.93□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Ftl2P49945 183 aa12.92□□□□□ -0.34
Ldb3-202ENSMUST00000022328 Exosc10P56960 887 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms