RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TRBV4-1A0A0J9YWV2 114 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 A0A1W2PPW3 197 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 A8MV72 311 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-208ENST00000558827 GMNNO75496 209 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 STAMBPO95630 424 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 SCG5P05408 212 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 H1F0P07305 194 aaKnown RBP10.76□□□□□ -0.69
SMAD3-208ENST00000558827 MMP7P09237 267 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-208ENST00000558827 TSPAN19P0C672 248 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 IGHV4-31P0DP07 118 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF32P17041 273 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 COL8A2P25067 703 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 LAP3P28838 519 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 PRDX6P30041 224 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 PPOXP50336 477 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 MXRA7P84157 204 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 VLDLRP98155 873 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 PLP2Q04941 152 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 SEC23BQ15437 767 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 SLC36A2Q495M3 483 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 SPATA46Q5T0L3 261 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 IL17RELQ6ZVW7 336 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 MBOAT2Q6ZWT7 520 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 CYP4Z1Q86W10 505 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 SLC7A13Q8TCU3 470 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 GTF3AQ92664 365 aaKnown RBP10.76□□□□□ -0.69
SMAD3-208ENST00000558827 RASD2Q96D21 266 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 NMD3Q96D46 503 aaKnown RBP10.76□□□□□ -0.69
SMAD3-208ENST00000558827 RBP7Q96R05 134 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 CDRT15Q96T59 188 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 BPESC1Q9GZL8 116 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 NARFLQ9H6Q4 476 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 CHODLQ9H9P2 273 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 EMC7Q9NPA0 242 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 CCNB1IP1Q9NPC3 277 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 SPAG4Q9NPE6 437 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 NDUFAF4Q9P032 175 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 RPS6KA6Q9UK32 745 aa10.76□□□□□ -0.69
SMAD3-208ENST00000558827 FAM32AQ9Y421 112 aaKnown RBP10.76□□□□□ -0.69
SMAD3-208ENST00000558827 ATRQ13535 2644 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 IQCMA0A1B0GVH7 501 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 LOC390937A0A1W2PQ73 354 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 MGRN1O60291 552 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 IGF2P01344 180 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 HPXP02790 462 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 CSF3P09919 207 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 APEHP13798 732 aaKnown RBP10.75□□□□□ -0.69
SMAD3-208ENST00000558827 TRIP10Q15642 601 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 FXNQ16595 210 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 TBC1D28Q2M2D7 210 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 ZBED5Q49AG3 693 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 C10orf128Q5T292 105 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 C6orf52Q5T4I8 152 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 CYB5R2Q6BCY4 276 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 RGS7BPQ6MZT1 257 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-208ENST00000558827 UGT2A3Q6UWM9 527 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF519Q8TB69 540 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 UBASH3BQ8TF42 649 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 NABP1Q96AH0 204 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 SEPHS2Q99611 448 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 MDFIQ99750 246 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 SOX7Q9BT81 388 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 KCNN2Q9H2S1 579 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 DENND2DQ9H6A0 471 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-208ENST00000558827 SIAEQ9HAT2 523 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 DCAF13Q9NV06 445 aaKnown RBP10.75□□□□□ -0.69
SMAD3-208ENST00000558827 TAAR3PQ9P1P4 343 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 SLC7A8Q9UHI5 535 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 TAGLN3Q9UI15 199 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 ARL2BPQ9Y2Y0 163 aa10.75□□□□□ -0.69
SMAD3-208ENST00000558827 LOC100509620A0A075B734 347 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 LOC100289279A0A1B0GTE1 492 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 C5orf49A4QMS7 147 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 M0R233 179 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 NDUFAB1O14561 156 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 SYNGR3O43761 229 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 TLX2O43763 284 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-208ENST00000558827 IL2RGP31785 369 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 APLNRP35414 380 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 MRPS34P82930 218 aaKnown RBP10.74□□□□□ -0.69
SMAD3-208ENST00000558827 PSG4Q00888 419 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 HNRNPA0Q13151 305 aaKnown RBP10.74□□□□□ -0.69
SMAD3-208ENST00000558827 NKPD1Q17RQ9 610 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF774Q6NX45 483 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 THSD4Q6ZMP0 1018 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 HDDC2Q7Z4H3 204 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 PIGWQ7Z7B1 504 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-208ENST00000558827 DEFB107AQ8IZN7 70 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 RNF113BQ8IZP6 322 aaKnown RBP10.74□□□□□ -0.69
SMAD3-208ENST00000558827 OR1J1Q8NGS3 322 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 NEU4Q8WWR8 484 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-208ENST00000558827 C7orf34Q96L11 122 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 SNX18Q96RF0 628 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 GPA33Q99795 319 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 ALG12Q9BV10 488 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 GRHPRQ9UBQ7 328 aa10.74□□□□□ -0.69
SMAD3-208ENST00000558827 IER3IP1Q9Y5U9 82 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms