RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 AHCYL1O43865 530 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 CNOT4O95628 575 aaKnown RBP12.04□□□□□ -0.48
CD44-224ENST00000526669 SCG5P05408 212 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 GNAO1P09471 354 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 IL32P24001 234 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 CRABP1P29762 137 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 ZNF133P52736 654 aaPredicted RBP12.04□□□□□ -0.48
CD44-224ENST00000526669 RPS7P62081 194 aaKnown RBP12.04□□□□□ -0.48
CD44-224ENST00000526669 TUBA1BP68363 451 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 TUBA4AP68366 448 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 TFF3Q07654 80 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 SGCAQ16586 387 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 MEP1BQ16820 701 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 HIKESHIQ53FT3 197 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 TTC23Q5W5X9 447 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 DNM1P34Q6PK57 102 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 B3GLCTQ6Y288 498 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 TUBA1AQ71U36 451 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 OR6K6Q8NGW6 343 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 FNDC8Q8TC99 324 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 KISS1RQ969F8 398 aaPredicted RBP12.04□□□□□ -0.48
CD44-224ENST00000526669 NMNAT2Q9BZQ4 307 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 EMC7Q9NPA0 242 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 FKBP7Q9Y680 259 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 ABCA4P78363 2273 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 A1L4Q6 167 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 CLEC18AA5D8T8 446 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 WIPF3A6NGB9 483 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 MPZL1O95297 269 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 HLA-DQA2P01906 255 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 SLC25A1P53007 311 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 IL5RAQ01344 420 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 APOFQ13790 326 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 KEAP1Q14145 624 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 P2RY6Q15077 328 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 GABRA6Q16445 453 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 FBXL19-AS1Q494R0 122 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 ZNF691Q5VV52 312 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 CLEC18BQ6UXF7 455 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 ENTHD1Q8IYW4 607 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 LRRC18Q8N456 261 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 CLEC18CQ8NCF0 446 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 OR2T4Q8NH00 348 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 NABP1Q96AH0 204 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 S100PBPQ96BU1 408 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 ZMYND19Q96E35 227 aaPredicted RBP12.03□□□□□ -0.48
CD44-224ENST00000526669 LRRC46Q96FV0 321 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 ZC3HAV1LQ96H79 300 aaKnown RBP12.03□□□□□ -0.48
CD44-224ENST00000526669 SH3GL3Q99963 347 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 ACTR6Q9GZN1 396 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 RACGAP1Q9H0H5 632 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
CD44-224ENST00000526669 TMEM38BQ9NVV0 291 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 PLCE1Q9P212 2302 aa12.03□□□□□ -0.48
CD44-224ENST00000526669 ROS1P08922 2347 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 CCDC182A6NF36 153 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 H0YJX3 145 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 C16orf97H3BN30 126 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 PATE4P0C8F1 98 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 PSMB1P20618 241 aaKnown RBP12.02□□□□□ -0.49
CD44-224ENST00000526669 LAP3P28838 519 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 UGT2B10P36537 528 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 CAPZA2P47755 286 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 SH3BGRP55822 239 aaPredicted RBP12.02□□□□□ -0.49
CD44-224ENST00000526669 EFNB1P98172 346 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 TGFBR3Q03167 851 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 TBRG1Q3YBR2 411 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 UGT2A3Q6UWM9 527 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 ZBTB46Q86UZ6 589 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 ZNF511Q8NB15 262 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 OR8J1Q8NGP2 316 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 OR52N5Q8NH56 324 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 C11orf40Q8WZ69 217 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
CD44-224ENST00000526669 MUS81Q96NY9 551 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 APOL4Q9BPW4 351 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 POLE4Q9NR33 117 aa12.02□□□□□ -0.49
CD44-224ENST00000526669 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 ZNF503-AS2A6NEH8 195 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 PRSS44E7EML9 344 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 H0YAE9 185 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 ENTPD6O75354 484 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 GLCEO94923 617 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 MRPL3P09001 348 aaKnown RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 GAAP10253 952 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 SLC2A5P22732 501 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 RPS27P42677 84 aaKnown RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 NUDT6P53370 316 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 MAD2L1BPQ15013 274 aaPredicted RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 LINC01590Q5TEZ4 76 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 ANKRD16Q6P6B7 361 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 FOXL2NBQ6ZUU3 175 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 C22orf34Q6ZV56 151 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 GLB1L2Q8IW92 636 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms