RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CWH43Q9H720 699 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF702PQ9H963 129 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 NANOGQ9H9S0 305 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SIAEQ9HAT2 523 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 DYRK4Q9NR20 520 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SAMSN1Q9NSI8 373 aaKnown RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CLN6Q9NWW5 311 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 TREM2Q9NZC2 230 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ZMAT5Q9UDW3 170 aaKnown RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SHPKQ9UHJ6 478 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 BTNL2Q9UIR0 455 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ING4Q9UNL4 249 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 MOKQ9UQ07 419 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 UGT2A1Q9Y4X1 527 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CDH10Q9Y6N8 788 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF646O15015 1829 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 FAM231BA6NCW3 169 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 A6NIZ1 184 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZFP92A6NM28 416 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 C12orf71A8MTZ7 269 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ERVV-1B6SEH8 477 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 HSBP1L1C9JCN9 74 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 C12orf77C9JDV5 145 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 AGPAT2O15120 278 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SIVA1O15304 175 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF780AO75290 641 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CLDN11O75508 207 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 FARS2O95363 451 aaKnown RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CD160O95971 181 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 NPPAP01160 153 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 IFNW1P05000 195 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SERPINA5P05154 406 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CLTAP09496 248 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 TACSTD2P09758 323 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CCDC166P0CW27 439 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 NR2C1P13056 603 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ATP6V1B2P21281 511 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 PRKACBP22694 351 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SLC2A5P22732 501 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SLC1A2P43004 574 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 RAP1BP61224 184 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SELENOTP62341 195 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 IRX3P78415 501 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 NDPQ00604 133 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ACVR1Q04771 509 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 GPNMBQ14956 572 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 VAMP3Q15836 100 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 RPEL1Q2QD12 228 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SOHLH1Q5JUK2 328 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CASC10Q5T4H9 136 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 TMIGD1Q6UXZ0 262 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF571Q7Z3V5 609 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF589Q86UQ0 364 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 FBXO16Q8IX29 292 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CMTM1Q8IZ96 169 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ST13P4Q8IZP2 240 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 PUSL1Q8N0Z8 303 aaKnown RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 LINC01555Q8NAE3 123 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 TMEM104Q8NE00 496 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 OR56A4Q8NGH8 313 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 OR51L1Q8NGJ5 315 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 OR10R2Q8NGX6 335 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 LILRB4Q8NHJ6 448 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF502Q8TBZ5 544 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SLC7A13Q8TCU3 470 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CD300LFQ8TDQ1 290 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 TMEM54Q969K7 222 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 TMIGD2Q96BF3 282 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 PIK3IP1Q96FE7 263 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF414Q96IQ9 312 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ARHGDIGQ99819 225 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 EBF4Q9BQW3 602 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 OSBPL10Q9BXB5 764 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 TM6SF2Q9BZW4 377 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ROGDIQ9GZN7 287 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 DEFB129Q9H1M3 183 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 OR2AG1Q9H205 316 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 PLGRKTQ9HBL7 147 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 SH2D2AQ9NP31 389 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZC4H2Q9NQZ6 224 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ABCB10Q9NRK6 738 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 AGPAT3Q9NRZ7 376 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 MARCH5Q9NX47 278 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 QPCTLQ9NXS2 382 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CALYQ9NYX4 217 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 XCL2Q9UBD3 114 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 RPS6KB2Q9UBS0 482 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF282Q9UDV7 671 aaPredicted RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 ASF1AQ9Y294 204 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 GOLT1BQ9Y3E0 138 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CNTNAP1P78357 1384 aa1.68□□□□□ -2.14
LMNB1-207ENST00000494185 EIF4G1Q04637 1599 aaKnown RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CFAP65Q6ZU64 1925 aaKnown RBP1.68□□□□□ -2.14
LMNB1-207ENST00000494185 CROCCQ5TZA2 2017 aa1.67□□□□□ -2.14
LMNB1-207ENST00000494185 MAP3K19Q56UN5 1328 aa1.67□□□□□ -2.14
LMNB1-207ENST00000494185 ADGRA3Q8IWK6 1321 aa1.67□□□□□ -2.14
LMNB1-207ENST00000494185 TRAV39A0A0B4J263 110 aa1.67□□□□□ -2.14
LMNB1-207ENST00000494185 PINLYPA6NC86 204 aa1.67□□□□□ -2.14
LMNB1-207ENST00000494185 RBMY1BA6NDE4 496 aaKnown RBP1.67□□□□□ -2.14
LMNB1-207ENST00000494185 A6NDN8 102 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms