RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ATP1B3P54709 279 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 SCRN3Q0VDG4 424 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 RBM39Q14498 530 aaKnown RBP11.54□□□□□ -0.56
VPS52-218ENST00000482399 PDSS1Q5T2R2 415 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 SHISA6Q6ZSJ9 500 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 SPICQ8N5J4 248 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 OR5M9Q8NGP3 310 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 OR1S1Q8NH92 325 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 PNPLA2Q96AD5 504 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 KTI12Q96EK9 354 aaPredicted RBP11.54□□□□□ -0.56
VPS52-218ENST00000482399 HHIPL1Q96JK4 782 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 ASB16Q96NS5 453 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 HEATR5AQ86XA9 2040 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 ASXL3Q9C0F0 2248 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 XRCC3O43542 346 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 SULT1B1O43704 296 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 SRPX2O60687 465 aaPredicted RBP11.54□□□□□ -0.56
VPS52-218ENST00000482399 CTAG2O75638 210 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 ZNF432O94892 652 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 S1PR1P21453 382 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 AGTR1P30556 359 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 ACAA2P42765 397 aaKnown RBP11.54□□□□□ -0.56
VPS52-218ENST00000482399 WDR38Q5JTN6 314 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 OR1S2Q8NGQ3 325 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 C16orf52Q8NHV5 167 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 ZNF764Q96H86 408 aaPredicted RBP11.54□□□□□ -0.56
VPS52-218ENST00000482399 DMRTA2Q96SC8 542 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 RPP25Q9BUL9 199 aaKnown RBP11.54□□□□□ -0.56
VPS52-218ENST00000482399 TBL1XR1Q9BZK7 514 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 SEC61A2Q9H9S3 476 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 EMC3Q9P0I2 261 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 GLS2Q9UI32 602 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 PCDHB10Q9UN67 800 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 UNC13CQ8NB66 2214 aa11.54□□□□□ -0.56
VPS52-218ENST00000482399 TRIM77I1YAP6 450 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 HTR3BO95264 441 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 KLF8O95600 359 aaPredicted RBP11.53□□□□□ -0.56
VPS52-218ENST00000482399 SFTPBP07988 381 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 CALCBP10092 127 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 ARRB1P49407 418 aaPredicted RBP11.53□□□□□ -0.56
VPS52-218ENST00000482399 TAS2R19P59542 299 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 KIR2DS3Q14952 304 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 TMEM71Q6P5X7 295 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 SLC16A9Q7RTY1 509 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 TEX19Q8NA77 164 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 ZSCAN1Q8NBB4 408 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 NPRL2Q8WTW4 380 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 G6PC3Q9BUM1 346 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 TCEAL2Q9H3H9 227 aaPredicted RBP11.53□□□□□ -0.56
VPS52-218ENST00000482399 MBD2Q9UBB5 411 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 MSRAQ9UJ68 235 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 DENND4CQ5VZ89 1909 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 GALR3O60755 368 aaPredicted RBP11.53□□□□□ -0.56
VPS52-218ENST00000482399 FBXO24O75426 580 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 PGAM2P15259 253 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 ST6GAL1P15907 406 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 RAB3AP20336 220 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 IL12BP29460 328 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 TSFMP43897 325 aaKnown RBP11.53□□□□□ -0.56
VPS52-218ENST00000482399 ADPRHP54922 357 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 ARFRP1Q13795 201 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 SWI5Q1ZZU3 235 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 ELFN2Q5R3F8 820 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 FCRL6Q6DN72 434 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 OR51A2Q8NGJ7 313 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 C12orf57Q99622 126 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 LPAR4Q99677 370 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 NPAS1Q99742 590 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 FAM60AQ9NP50 221 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 HAO2Q9NYQ3 351 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 CPNE7Q9UBL6 633 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 RNH1P13489 461 aaKnown RBP11.53□□□□□ -0.56
VPS52-218ENST00000482399 HTR2CP28335 458 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 H3F3CQ6NXT2 135 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 TTLL10Q6ZVT0 673 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 COX15Q7KZN9 410 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 CMIPQ8IY22 773 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 OR52H1Q8NGJ2 320 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 STACQ99469 402 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 SHARPINQ9H0F6 387 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 LDAHQ9H6V9 325 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 EPHA6Q9UF33 1036 aa11.53□□□□□ -0.56
VPS52-218ENST00000482399 FREM3P0C091 2139 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 C17orf105B2RV13 164 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 CTDSPLO15194 276 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 OIP5O43482 229 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 MPZL1O95297 269 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 HNRNPA1P09651 372 aaKnown RBP eCLIP11.52□□□□□ -0.56
VPS52-218ENST00000482399 UBBP0CG47 229 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 UBCP0CG48 685 aaKnown RBP11.52□□□□□ -0.56
VPS52-218ENST00000482399 CPN1P15169 458 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 NAGAP17050 411 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 RIDAP52758 137 aaKnown RBP11.52□□□□□ -0.56
VPS52-218ENST00000482399 DHRS2Q13268 280 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 SNTB1Q13884 538 aaKnown RBP11.52□□□□□ -0.56
VPS52-218ENST00000482399 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms