RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 GMNCA6NCL1 334 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 HMGN4O00479 90 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 FBP2O00757 339 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ANGPT2O15123 496 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 FADS1O60427 444 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TRIM3O75382 744 aaPredicted RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 TRAPPC6AO75865 159 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SNX4O95219 450 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 KRT75O95678 551 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 OXSR1O95747 527 aaPredicted RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 ANGPTL1O95841 491 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 BCHEP06276 602 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TPOP07202 933 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SPARCP09486 303 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 HPGDP15428 266 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ABOP16442 354 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ATP6V1C1P21283 382 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 CRATP43155 626 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 PSMD4P55036 377 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 CASP6P55212 293 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 MTPNP58546 118 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 DSTNP60981 165 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 PSPHP78330 225 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 MRPS34P82930 218 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 HPCAP84074 193 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 LRRC74AQ0VAA2 488 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SELPLGQ14242 412 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 CAPRIN1Q14444 709 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 CD226Q15762 336 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SYPL1Q16563 259 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 C3AR1Q16581 482 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 NDUFAF6Q330K2 333 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 GPAT3Q53EU6 434 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 EIPR1Q53HC9 387 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 PDZK1Q5T2W1 519 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 NSUN5P2Q63ZY6 315 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TIGD3Q6B0B8 471 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 REP15Q6BDI9 236 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SLC30A6Q6NXT4 461 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ZCCHC12Q6PEW1 402 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 BHLHB9Q6PI77 547 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 APOOLQ6UXV4 268 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 C3P1Q6ZMU1 363 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 NCCRP1Q6ZVX7 275 aaPredicted RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 CPLX4Q7Z7G2 160 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 YRDCQ86U90 279 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 MARCH3Q86UD3 253 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SLC22A16Q86VW1 577 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SNX32Q86XE0 403 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 MSRB3Q8IXL7 192 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 PM20D2Q8IYS1 436 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 C10orf111Q8N326 155 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TMCO5AQ8N6Q1 288 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TRIML2Q8N7C3 387 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ANKFN1Q8N957 763 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TMEM116Q8NCL8 245 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 RBM15BQ8NDT2 890 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 ST6GALNAC3Q8NDV1 305 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 OR2M3Q8NG83 312 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 OR4K17Q8NGC6 315 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 OR1J4Q8NGS1 313 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 OR4C3Q8NH37 302 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 GOT1L1Q8NHS2 421 aaPredicted RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 RNF138Q8WVD3 245 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ROPN1LQ96C74 230 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SH3YL1Q96HL8 342 aaPredicted RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 SECISBP2Q96T21 854 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 SDF2Q99470 211 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 BARD1Q99728 777 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 KLHDC3Q9BQ90 382 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SLC39A3Q9BRY0 314 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ANGPTL4Q9BY76 406 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TBL1XR1Q9BZK7 514 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 DSN1Q9H410 356 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 IKZF5Q9H5V7 419 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 ZDHHC11Q9H8X9 412 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 TPT1P8Q9HAU6 139 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SLC52A3Q9NQ40 469 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SAR1AQ9NR31 198 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 EXD2Q9NVH0 621 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SLC25A37Q9NYZ2 338 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 MED11Q9P086 117 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 VAPAQ9P0L0 249 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SPRR3Q9UBC9 169 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 B4GALT7Q9UBV7 327 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 LEF1Q9UJU2 399 aaPredicted RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 DKKL1Q9UK85 242 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 MRTO4Q9UKD2 239 aaKnown RBP3.86□□□□□ -1.79
PMS1-202ENST00000374826 ABCG2Q9UNQ0 655 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 C15orf41Q9Y2V0 281 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 SLC6A5Q9Y345 797 aa3.86□□□□□ -1.79
PMS1-202ENST00000374826 CENPEQ02224 2701 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 ARID1AO14497 2285 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 C15orf38-AP3S2A0A0A6YYH1 394 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 TRGV5A0A0B4J1U4 118 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 IGKV3D-20A0A0C4DH25 116 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 A0A1B0GVC2 190 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 A0A1W2PPI3 338 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 DUXAA6NLW8 204 aa3.85□□□□□ -1.79
PMS1-202ENST00000374826 CLDN24A6NM45 220 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms