RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 IKZF1Q13422 519 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TOMM34Q15785 309 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SMN1Q16637 294 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RALGAPA2Q2PPJ7 1873 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 HAGHLQ6PII5 290 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RFPL4BQ6ZWI9 263 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 NKAIN4Q8IVV8 208 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 IL1F10Q8WWZ1 152 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SPACA9Q96E40 222 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF681Q96N22 645 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM43Q9BTV4 400 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SELENOIQ9C0D9 397 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PPA2Q9H2U2 334 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 OR51B6Q9H340 312 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PSME4Q14997 1843 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 KIR2DS1A0A191URI9 304 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 OR6C6A6NF89 314 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SPINT2O43291 252 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 CBX7O95931 251 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 IFNA4P05014 189 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 CYC1P08574 325 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 GIFP27352 417 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 KIR2DS4P43632 304 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 VEGFCP49767 419 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RUNX2Q13950 521 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 KIR2DS1Q14954 304 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TCTN3Q6NUS6 607 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ESPNLQ6ZVH7 1005 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ADGRF3Q8IZF5 1079 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 OR13C9Q8NGT0 318 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TAAR8Q969N4 342 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SLC25A46Q96AG3 418 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TIMD4Q96H15 378 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PLA2G2FQ9BZM2 168 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RBFOX1Q9NWB1 397 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 NDRG3Q9UGV2 375 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PIGLQ9Y2B2 252 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PRSS37A4D1T9 235 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SOCS6O14544 535 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ICOSLGO75144 302 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SOD1P00441 154 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 BLVRBP30043 206 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 AQP6Q13520 282 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 GLYR1Q49A26 553 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 DESI1Q6ICB0 168 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 CCDC28AQ8IWP9 274 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF679Q8IYX0 411 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SIRT6Q8N6T7 355 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SMRP1Q8NCR6 262 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 OR14K1Q8NGZ2 314 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SMAP2Q8WU79 429 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 FAM3DQ96BQ1 224 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TSNAXQ99598 290 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 NECAP2Q9NVZ3 263 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PROCRQ9UNN8 238 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 LOC285556D6RIA3 1793 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 A0A0A6YYH2 397 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1W2PPC1 479 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 A6NJ64 397 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ACOD1A6NK06 481 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM200CA6NKL6 621 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SCAF4O95104 1147 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ETHE1O95571 254 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TFAP2AP05549 437 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PSMB1P20618 241 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 HLA-DMAP28067 261 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 LAP3P28838 519 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PTGS2P35354 604 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RAD52P43351 418 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 GFERP55789 205 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RAB11AP62491 216 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 HBG1P69891 147 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 HBG2P69892 147 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 WDR74Q6RFH5 385 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RDH10Q8IZV5 341 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SGK3Q96BR1 496 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RASD2Q96D21 266 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ERVMER34-1Q9H9K5 563 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 BCO1Q9HAY6 547 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 GMPR2Q9P2T1 348 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 COA3Q9Y2R0 106 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 GPR55Q9Y2T6 319 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ARGFXA6NJG6 315 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 GABARAPH6UMI1 98 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TSPAN15O95858 294 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 QDPRP09417 244 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 MPLP40238 635 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 CLDN6P56747 220 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 RPS25P62851 125 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SLC35A2P78381 396 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 CLN3Q13286 438 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 SQSTM1Q13501 440 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PRTGQ2VWP7 1150 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF385BQ569K4 471 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 FAHD1Q6P587 224 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 MEX3BQ6ZN04 569 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 CD163Q86VB7 1156 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF573Q86YE8 665 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ACBD4Q8NC06 268 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 DEDD2Q8WXF8 326 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms