RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 LRRC75AQ8NAA5 344 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 RDH5Q92781 318 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 NABP1Q96AH0 204 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 RBP7Q96R05 134 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 FNDC11Q9BVV2 318 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 TPK1Q9H3S4 243 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 CDH20Q9HBT6 801 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 SLCO1C1Q9NYB5 712 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 MYEF2Q9P2K5 600 aaKnown RBP15.22■□□□□ 0.03
HDDC3-201ENST00000330334 DUSP13Q9UII6 198 aa15.22■□□□□ 0.03
HDDC3-201ENST00000330334 LRP5LA4QPB2 252 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 NME4O00746 187 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 PIP5K1CO60331 668 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 PRSS23O95084 383 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 MAKP20794 623 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 ACHEP22303 614 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 SLC9A3P48764 834 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 SLC7A2P52569 658 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 SEC24CP53992 1094 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 FHL1Q13642 323 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 MOGQ16653 247 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 IFI44LQ53G44 452 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 FAM120AOSQ5T036 256 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 NRMQ8IXM6 262 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 C1orf174Q8IYL3 243 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 LRRC18Q8N456 261 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 SYNPRQ8TBG9 265 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 ACOT11Q8WXI4 607 aaPredicted RBP15.21■□□□□ 0.03
HDDC3-201ENST00000330334 C11orf40Q8WZ69 217 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 TMEM158Q8WZ71 300 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 ANKRD19PQ9H560 264 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 SNX13Q9Y5W8 968 aa15.21■□□□□ 0.03
HDDC3-201ENST00000330334 A0A1W2PPW3 197 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 A6NIZ1 184 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 GSTA4O15217 222 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 SLC2A10O95528 541 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 HPXP02790 462 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 FAM157BP0CG42 384 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 SAGP10523 405 aaPredicted RBP15.2■□□□□ 0.02
HDDC3-201ENST00000330334 CCL2P13500 99 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 HNF1AP20823 631 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 FUT4P22083 530 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 APLNRP35414 380 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 KLF3P57682 345 aaPredicted RBP15.2■□□□□ 0.02
HDDC3-201ENST00000330334 CTXN1P60606 82 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 RAP1BP61224 184 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 RAP1AP62834 184 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 HSF2Q03933 536 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 CD47Q08722 323 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 PABPC1L2AQ5JQF8 200 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 FOXL2NBQ6ZUU3 175 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 TMPRSS11FQ6ZWK6 438 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 MBOAT2Q6ZWT7 520 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 OAFQ86UD1 273 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 ARIH2OSQ8N7S6 290 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 LINC01356Q8N9X3 169 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 CPEB3Q8NE35 698 aaKnown RBP15.2■□□□□ 0.02
HDDC3-201ENST00000330334 SOX7Q9BT81 388 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 CCNB1IP1Q9NPC3 277 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 NKIRAS2Q9NYR9 191 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 FZR1Q9UM11 496 aa15.2■□□□□ 0.02
HDDC3-201ENST00000330334 A0A087WUU8 490 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 IGKV1D-43A0A0B4J1Z2 117 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 RNF212BA8MTL3 300 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 EFCAB9A8MZ26 197 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 LYNX1G3V0Z9 82 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 ATP8B1O43520 1251 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 AHCYL1O43865 530 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 ZNF682O95780 498 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 LYNX1P0DP58 116 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 NAT2P11245 290 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 SRD5A1P18405 259 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 TCN1P20061 433 aaPredicted RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 COL8A2P25067 703 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 STOMP27105 288 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 APEX1P27695 318 aaKnown RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 CDAP32320 146 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 GUCA1AP43080 201 aaPredicted RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 YAP1P46937 504 aaKnown RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 GSK3BP49841 420 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 MAD2L1BPQ15013 274 aaPredicted RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 PCGF3Q3KNV8 242 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 UNQ6126/PRO20091Q6UXV3 157 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 FKBP9P1Q75LS8 142 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 TREML1Q86YW5 311 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 CMTM5Q96DZ9 223 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 POM121L2Q96KW2 1035 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 SNX18Q96RF0 628 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 WACQ9BTA9 647 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 RACGAP1Q9H0H5 632 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 HINT3Q9NQE9 182 aaKnown RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 TAAR3PQ9P1P4 343 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 GMPR2Q9P2T1 348 aaKnown RBP15.19■□□□□ 0.02
HDDC3-201ENST00000330334 RHCGQ9UBD6 479 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 ABCD2Q9UBJ2 740 aa15.19■□□□□ 0.02
HDDC3-201ENST00000330334 C17orf100A8MU93 164 aa15.18■□□□□ 0.02
HDDC3-201ENST00000330334 J3KTA2 159 aa15.18■□□□□ 0.02
HDDC3-201ENST00000330334 ICMTO60725 284 aa15.18■□□□□ 0.02
HDDC3-201ENST00000330334 CLPTM1O96005 669 aa15.18■□□□□ 0.02
HDDC3-201ENST00000330334 SERPINA1P01009 418 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms