RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TRAPPC13A5PLN9 417 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 PNMTP11086 282 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 NR4A1P22736 598 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 YAP1P46937 504 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 SH3BGRP55822 239 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 CLDN17P56750 224 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 ACTG1P63261 375 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 NPRL3Q12980 569 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 SNTB2Q13425 540 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF613Q6PF04 617 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 THSD4Q6ZMP0 1018 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 PEG10Q86TG7 708 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 C3orf56Q8N813 242 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 SGMS2Q8NHU3 365 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 ADAMTS16Q8TE57 1224 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 PTDSS2Q9BVG9 487 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 CRLF2Q9HC73 371 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 MOV10Q9HCE1 1003 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 B3GNT2Q9NY97 397 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 TREM2Q9NZC2 230 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 B3GAT1Q9P2W7 334 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 AURKCQ9UQB9 309 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 CMAHPQ9Y471 501 aa14.14□□□□□ -0.15
SHKBP1-215ENST00000597649 TPST2O60704 377 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 SEC14L2O76054 403 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 OR5F1O95221 314 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 AVPP01185 164 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 FABP3P05413 133 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 UMPSP11172 480 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 NQO1P15559 274 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 PCMT1P22061 227 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 ARR3P36575 388 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 LMO4P61968 165 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 POU3F1Q03052 451 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 EGR4Q05215 589 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 CEACAM16Q2WEN9 425 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 PHYHD1Q5SRE7 291 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 LRP11Q86VZ4 500 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 FAM216AQ8WUB2 273 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 GCDHQ92947 438 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 YIPF5Q969M3 257 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 SLC25A36Q96CQ1 311 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 SLC41A3Q96GZ6 507 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF75AQ96N20 296 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 FNDC11Q9BVV2 318 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 MAGIXQ9H6Y5 334 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 C12orf10Q9HB07 376 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 REV1Q9UBZ9 1251 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 SLC7A7Q9UM01 511 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 ENPP4Q9Y6X5 453 aa14.13□□□□□ -0.15
SHKBP1-215ENST00000597649 A0A0B4J2E0 115 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 A0A1B0GX12 115 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 DHRS12A0PJE2 317 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 SYNGR3O43761 229 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 MSMBP08118 114 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 GAAP10253 952 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 HOXB6P17509 224 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 ALDH3B1P43353 468 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 GPR6P46095 362 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 EVX1P49640 407 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 ERFP50548 548 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 CDH12P55289 794 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 ST3GAL3Q11203 375 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 PIN1Q13526 163 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 ZDHHC21Q8IVQ6 265 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 MFSD8Q8NHS3 518 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 STK35Q8TDR2 534 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 UTP4Q969X6 686 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 MRPL24Q96A35 216 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 ZMYND19Q96E35 227 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 KTI12Q96EK9 354 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 PRRC1Q96M27 445 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 MYEF2Q9P2K5 600 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 RIMS3Q9UJD0 308 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 PCDHB10Q9UN67 800 aa14.12□□□□□ -0.15
SHKBP1-215ENST00000597649 CHP2O43745 196 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 SLC43A1O75387 559 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 HLA-HP01893 362 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 RAP2AP10114 183 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 SAGP10523 405 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF35P13682 527 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF43P17038 809 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 RHCEP18577 417 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 HILS1P60008 231 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 MAD2L1BPQ15013 274 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 FAHD2BQ6P2I3 314 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 TTC33Q6PID6 262 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 WDFY1Q8IWB7 410 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 IL17RDQ8NFM7 739 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF418Q8TF45 676 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 CANT1Q8WVQ1 401 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 RDH5Q92781 318 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 SLC38A4Q969I6 547 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 FAHD2AQ96GK7 314 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 C7orf34Q96L11 122 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF347Q96SE7 839 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 SYT3Q9BQG1 590 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms