RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 KLF9Q13886 244 aaPredicted RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 TMEM225Q6GV28 225 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 ZNF529Q6P280 563 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 ZNF704Q6ZNC4 412 aaPredicted RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 USP53Q70EK8 1073 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 ZNF679Q8IYX0 411 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 STACQ99469 402 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 A0A0J9YY10 115 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 POM121BA6NF01 834 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 H0Y8X5 98 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 H7C417 338 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 BHLHE40O14503 412 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 ZNF254O75437 659 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 IGF2P01344 180 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 OPN1LWP04000 364 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 SERPINA5P05154 406 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 GABRA1P14867 456 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 MGMTP16455 207 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 TM4SF4P48230 202 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 MELKQ14680 651 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 USF2Q15853 346 aaPredicted RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 FAM189A2Q15884 450 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 SPIN3Q5JUX0 258 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 ZNF626Q68DY1 528 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 MED25Q71SY5 747 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 OR1J2Q8NGS2 313 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 OR10Z1Q8NGY1 313 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 OR2G2Q8NGZ5 317 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 FAM3CQ92520 227 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 JSRP1Q96MG2 331 aaPredicted RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 SULT4A1Q9BR01 284 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 TINAGL1Q9GZM7 467 aaPredicted RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 GAREM1Q9H706 876 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 EVA1AQ9H8M9 152 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 SDHAF3Q9NRP4 125 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 CPNE7Q9UBL6 633 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 MSRAQ9UJ68 235 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 PMP2P02689 132 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 CXCL2P19875 107 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 EPHA4P54764 986 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 SNRPNP63162 240 aaKnown RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 NSDHLQ15738 373 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 SGCAQ16586 387 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 ACOT7LQ6ZUV0 252 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 LRRTM1Q86UE6 522 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 MCATQ8IVS2 390 aaKnown RBP9.61□□□□□ -0.87
USB1-212ENST00000566082 OR4K15Q8NH41 348 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 OR14A16Q8NHC5 309 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 HSD17B8Q92506 261 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 HGDQ93099 445 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 TAS2R4Q9NYW5 299 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 VDAC3Q9Y277 283 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 RHBDD3Q9Y3P4 386 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 P2RY10O00398 339 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 XRCC3O43542 346 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 MTRF1O75570 445 aaKnown RBP9.6□□□□□ -0.87
USB1-212ENST00000566082 OR2F2O95006 317 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 APOC1P02654 83 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 AVPR2P30518 371 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 OR2F1Q13607 317 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 TMEM244Q5VVB8 128 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 PWWP2BQ6NUJ5 590 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 MARCH3Q86UD3 253 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 TMEM200AQ86VY9 491 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 RFLNBQ8N5W9 214 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 OR1E3Q8WZA6 343 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 HHIPQ96QV1 700 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 KCNG2Q9UJ96 466 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 SLC22A7Q9Y694 548 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 LAMA3Q16787 3333 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 SCGNO76038 276 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 GLSO94925 669 aaPredicted RBP9.6□□□□□ -0.87
USB1-212ENST00000566082 OR8U9P0C7N5 309 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 SLC35E2P0CK97 266 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 PI3P19957 117 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 CNR1P21554 472 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 CRABP1P29762 137 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 NPY4RP50391 375 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 CLRN1P58418 232 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 TAS2R31P59538 309 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 FUT5Q11128 374 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 TDGQ13569 410 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 SLC36A2Q495M3 483 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 ABHD12BQ7Z5M8 362 aaPredicted RBP9.6□□□□□ -0.87
USB1-212ENST00000566082 SPICQ8N5J4 248 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 BVESQ8NE79 360 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 BPIFCQ8NFQ6 507 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 OR4S1Q8NGB4 309 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 NUDCD2Q8WVJ2 157 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 TMEM234Q8WY98 164 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 OR10A5Q9H207 317 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 KCNK15Q9H427 330 aa9.6□□□□□ -0.87
USB1-212ENST00000566082 KIR3DX1Q9H7L2 352 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms