RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 AP3M1Q9Y2T2 418 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 CMAHPQ9Y471 501 aa10.8□□□□□ -0.68
SMAD3-208ENST00000558827 MALRD1Q5VYJ5 2156 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 CHD3Q12873 2000 aaKnown RBP10.79□□□□□ -0.68
SMAD3-208ENST00000558827 A0A087WUU8 490 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 VSTM5A8MXK1 200 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 EFCAB9A8MZ26 197 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 UBL3O95164 117 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 IGFBP1P08833 259 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-208ENST00000558827 THRBP10828 461 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF35P13682 527 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 CCNOP22674 350 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 PAX7P23759 505 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF84P51523 738 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 DSCR9P59020 149 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 ERVS71-1P61550 626 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 ERVK-25P63136 954 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 GALK2Q01415 458 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 EFNB3Q15768 340 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 TMEM249Q2WGJ8 235 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 IQCCQ4KMZ1 466 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 TMEM53Q6P2H8 277 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 HACD2Q6Y1H2 254 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF627Q7L945 461 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 OFCC1Q8IZS5 231 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 IL17RDQ8NFM7 739 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 CMTM5Q96DZ9 223 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 MRPL13Q9BYD1 178 aaKnown RBP10.79□□□□□ -0.68
SMAD3-208ENST00000558827 POLR2J2Q9GZM3 115 aaKnown RBP10.79□□□□□ -0.68
SMAD3-208ENST00000558827 NSRP1Q9H0G5 558 aaKnown RBP10.79□□□□□ -0.68
SMAD3-208ENST00000558827 POLR2J3Q9H1A7 115 aaKnown RBP10.79□□□□□ -0.68
SMAD3-208ENST00000558827 TXNIPQ9H3M7 391 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 FKBP7Q9Y680 259 aa10.79□□□□□ -0.68
SMAD3-208ENST00000558827 IGHV4-61A0A0C4DH41 118 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 CD5LO43866 347 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 CLPTM1O96005 669 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 SERPINA5P05154 406 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 USF1P22415 310 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 RPL4P36578 427 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 DAP3P51398 398 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 RPL27P61353 136 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 PRKCDQ05655 676 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 FGD3Q5JSP0 725 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 PODNL1Q6PEZ8 512 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 OAFQ86UD1 273 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 LRRC75AQ8NAA5 344 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 SLC30A7Q8NEW0 376 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 OR52J3Q8NH60 311 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 AKR7LQ8NHP1 331 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 FAM46AQ96IP4 442 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 TSPAN32Q96QS1 320 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 ZNF442Q9H7R0 627 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 CDH20Q9HBT6 801 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 MOV10Q9HCE1 1003 aaKnown RBP10.78□□□□□ -0.68
SMAD3-208ENST00000558827 IL20RAQ9UHF4 553 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 HIF3AQ9Y2N7 669 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 SPEF1Q9Y4P9 236 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 UGT2A1Q9Y4X1 527 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 ENPP4Q9Y6X5 453 aa10.78□□□□□ -0.68
SMAD3-208ENST00000558827 A0A1W2PPL8 197 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 LRP5LA4QPB2 252 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 CDC42EP2O14613 210 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 IMPA2O14732 288 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 CRLF1O75462 422 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 PDE5AO76074 875 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 PRSS23O95084 383 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 LCKP06239 509 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 NAT2P11245 290 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 DAOP14920 347 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 SLC25A16P16260 332 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF16P17020 682 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF26P17031 533 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 GLRXP35754 106 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 NR4A2P43354 598 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 SLC9A3P48764 834 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 HSF2Q03933 536 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 GLO1Q04760 184 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 LOXL1Q08397 574 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 DBPQ10586 325 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 FHL1Q13642 323 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 KRTAP21-3Q3LHN1 58 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 PABPC1L2AQ5JQF8 200 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 SLC25A47Q6Q0C1 308 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 RRM2BQ7LG56 351 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 ARIH2OSQ8N7S6 290 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 CPEB3Q8NE35 698 aaKnown RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 LIPHQ8WWY8 451 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 ACOT11Q8WXI4 607 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 Q96M85 177 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 PIMREGQ9BSJ6 248 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 RERGLQ9H628 205 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 NMNAT1Q9HAN9 279 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-208ENST00000558827 ABCD2Q9UBJ2 740 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 REV1Q9UBZ9 1251 aa10.77□□□□□ -0.69
SMAD3-208ENST00000558827 ADAM18Q9Y3Q7 739 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms