RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CXCR1	P25024	350 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FKBP2	P26885	142 aa	Known RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	WNT5A	P41221	380 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HTR3A	P46098	478 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	UCP2	P55851	309 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CD69	Q07108	199 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HERPUD1	Q15011	391 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SMU1	Q2TAY7	513 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MS4A18	Q3C1V0	323 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ESCO2	Q56NI9	601 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LYPD2	Q6UXB3	125 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651		Q6ZR03	302 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZNF101	Q8IZC7	436 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MIER2	Q8N344	545 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OR1J1	Q8NGS3	322 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PPP1R35	Q8TAP8	253 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SFXN5	Q8TD22	340 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DCAKD	Q8WVC6	231 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C11orf40	Q8WZ69	217 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OXGR1	Q96P68	337 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ARHGDIG	Q99819	225 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FOXB1	Q99853	325 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RHOXF2	Q9BQY4	288 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	NUDT16L1	Q9BRJ7	211 aa	Known RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PCGF1	Q9BSM1	259 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C1orf50	Q9BV19	199 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TAPBPL	Q9BX59	468 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	POFUT1	Q9H488	388 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MOV10	Q9HCE1	1003 aa	Known RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	EXOSC3	Q9NQT5	275 aa	Known RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLCO1C1	Q9NYB5	712 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	NINJ2	Q9NZG7	142 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC17A7	Q9P2U7	560 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	EMCN	Q9ULC0	261 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	POFUT2	Q9Y2G5	429 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CHST2	Q9Y4C5	530 aa		7.14	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PCLO	Q9Y6V0	5065 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651		A8MVM7	634 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LRRN3	E7EW58	273 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651		G3V2L1	256 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LSM1	O15116	133 aa	Known RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MGRN1	O60291	552 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TSPAN9	O75954	239 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	VAMP5	O95183	116 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MT-ND5	P03915	603 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TFPT	P0C1Z6	253 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PPIAL4G	P0DN37	164 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DLX1	P56177	255 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	BTG1	P62324	171 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MAPK11	Q15759	364 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FAM153C	Q494X1	144 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MMEL1	Q495T6	779 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TMEM155	Q4W5P6	130 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FAM209A	Q5JX71	171 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MRPL2	Q5T653	305 aa	Known RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FAM205BP	Q63HN1	556 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LRRN1	Q6UXK5	716 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZNF627	Q7L945	461 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	VRK2	Q86Y07	508 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	KLB	Q86Z14	1044 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CCDC36	Q8IYA8	594 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	KLHL36	Q8N4N3	616 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CPEB3	Q8NE35	698 aa	Known RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C19orf18	Q8NEA5	215 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZNF420	Q8TAQ5	688 aa	Predicted RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC25A40	Q8TBP6	338 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SSMEM1	Q8WWF3	244 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CFHR4	Q92496	578 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TAAR8	Q969N4	342 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FAM71F1	Q96KD3	344 aa	Predicted RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PAFAH2	Q99487	392 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	IQCG	Q9H095	443 aa	Known RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC38A1	Q9H2H9	487 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DENND2D	Q9H6A0	471 aa	Predicted RBP	7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CDH20	Q9HBT6	801 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TMEM165	Q9HC07	324 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	POMT1	Q9Y6A1	747 aa		7.13	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HUWE1	Q7Z6Z7	4374 aa	Known RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RNF103-CHMP3	A0A140T963	221 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CFAP73	A6NFT4	308 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	POC1B-GALNT4	F8VUJ3	575 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MFN2	O95140	757 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CYB5R3	P00387	301 aa	Predicted RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	KRT16	P08779	473 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CD28	P10747	220 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MMP9	P14780	707 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TAC1	P20366	129 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DRD4	P21917	467 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC6A2	P23975	617 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	GRPR	P30550	384 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HOXD3	P31249	432 aa	Predicted RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RPL4	P36578	427 aa	Known RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CFHR2	P36980	270 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ERF	P50548	548 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TNFAIP6	P98066	277 aa	Predicted RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CALCOCO2	Q13137	446 aa		7.12	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms